DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a21

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_006541333.1 Gene:Slc6a21 / 76713 MGIID:1923963 Length:749 Species:Mus musculus


Alignment Length:675 Identity:162/675 - (24%)
Similarity:291/675 - (43%) Gaps:146/675 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGC 125
            ::..|.:...:|.|:|||:.||||::..:||||:||:.|.|:|||:|.|:.|:|::|||:.....
Mouse    52 AKKTENILILVAFSIGLGSTWRFPYLCHQNGGGSFLLMYFILLLLLGIPLMYMEMVIGQWLRMDN 116

  Fly   126 IRAFD-MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYC-LVE-----WGK 183
            |:|:. :.|.:.|:.|..:.:..|...|.:.:::.::.||..||...|||..| |||     .|.
Mouse   117 IQAWKYLVPWLSGVGYSNILACVLVVLYNSALVSWSLFYLGQSFDYPLPWQNCPLVENLSMVAGN 181

  Fly   184 SCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILS 248
            :|:.:              ...:.|:..|:|:....::: |:.....::.|||.|||:.:...:.
Mouse   182 TCLWS--------------EPHQYFWYHTLLQASNQMEE-GIEVLVLNVTLCLFATWIFLYVTMV 231

  Fly   249 KGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGA-----WQGIVYFLKPQWSQLLNPHVWYAAIT 308
            ..|:.|.....|..||..|:::...||.:.|.|:     |:.:...|    |.|.:...|..|..
Mouse   232 TRIKISVLMMIFSILFSNVLLLCFFIRTLFLNGSVRASLWRLVTIEL----SILSSLDAWRQAGG 292

  Fly   309 QMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTK--- 370
            .:.:||.:..||::.::::....:|..|....:..::..||:|:..:||.::|   |.|.|.   
Mouse   293 HVLYSLGLGMGTIITFSTYQPRGENYIKWASFVAMVNLATSLLSSFVIFLVMG---FWTTTSGTM 354

  Fly   371 --------------------------DI--------------------SQV-------------- 375
                                      ||                    |||              
Mouse   355 CIKRSVSNLINLIANGVLPKAAWPPGDIIHKPPLEYLAWINQLPNNLKSQVIHQTLPCSILIQKE 419

  Fly   376 -VKGGAGLAFISYPEAIAKFKYLP--QLFAVLFFFMLLVLGIGSNIGMASAVVNVVK---DRFTH 434
             :..|.||:::::.:||:.|   |  ..:|::||..|.::|:|:.:.:...:|..::   ..|..
Mouse   420 KIMEGPGLSYVAFSQAISLF---PGSSFWAIIFFMSLAIMGLGTMLTLLEGIVLPLQKSISTFAK 481

  Fly   435 LPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSD 499
            .|: |:.|...:.|||..||:.:..|.:|:.|.|......:.:::.:.:.|::.|:||:||..::
Mouse   482 HPN-LVQVLVCLGGFLGSLVFSSRPGSYVVFLFDDLLVPMVLIIIVVIQNLSLAWLYGIKRFRAE 545

  Fly   500 IEFMLNVKTSFYW---RICWAIVA-PGLMFLVLVYMLFSYEPLTYRG--------------VQYP 546
            :...|.   |..|   ...|:.|. |.|:.|:.:|.|..|    |.|              |:.|
Mouse   546 VFGQLG---SLVWSPFTFLWSYVTLPTLLVLLTIYFLNLY----YSGSPYYVSWNDSMSHEVKQP 603

  Fly   547 PVYYMAGWIIWGLGVLQL---------PFWAL--VTIYQQPGKTFGSKFGLAMQPTANWGPLQTQ 600
            ......||:.: |.||.|         .:|.|  ..|.:...|...||..:.:.......|:...
Mouse   604 YKKIPLGWVTF-LSVLALLPILVYPLQHWWYLDDPNICETLEKPLSSKKTVTVPNRVTQWPVHPM 667

  Fly   601 KFEAYIIHRKREADF--KSPRGGYL 623
            :........|.:|.|  |||...:|
Mouse   668 RKLTLRNQEKSKALFQSKSPPENFL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 136/555 (25%)
Slc6a21XP_006541333.1 SLC5-6-like_sbd 48..622 CDD:382020 148/603 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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