DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a1a

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001038752.2 Gene:slc6a1a / 692318 ZFINID:ZDB-GENE-060519-23 Length:679 Species:Danio rerio


Alignment Length:603 Identity:194/603 - (32%)
Similarity:310/603 - (51%) Gaps:52/603 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SNDGISTVIYSAEGEELTINCEAESESS---------GQRDQWSRGVEFLFSCIALSVGLGNVWR 82
            |.||  .|:  .|..|:|.|.:.::|.:         ..|:.|....:||.||:..::|||||||
Zfish     8 STDG--QVV--TELNEITTNDKPKTEDAKPEKNKKDIPDRETWGGKFDFLLSCVGYAIGLGNVWR 68

  Fly    83 FPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTA 147
            ||::..:||||||||||.:.|:..|.|:::||..:||::|.|.:..:.:||:.:|:.......:.
Zfish    69 FPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECALGQYTSIGGLGVWKLAPMFKGVGLAAAVLSF 133

  Fly   148 LATTYYACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATGATAANDSSIVQGVSSAELFFTQT 212
            ....||..|:|..:.||..||:..|||..|...|......|..:..:.:::...|..   |:.:.
Zfish   134 WLNIYYIVIIAWALYYLYNSFTTDLPWKSCNNPWNTDRCYTNYSIVDTTNLTSAVME---FWERN 195

  Fly   213 VLREPESLDDNG-LGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRA 276
            |.:..:.|:..| :..|   |.:.|...||::...:.||:..:||..||.|.:||.::.:|.||.
Zfish   196 VHQMTDGLEKPGEIRVP---LAITLAIAWVLVYFCIWKGVSWTGKVVYFSATYPYFMLFILFIRG 257

  Fly   277 VTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIII 341
            ||||||.:||::::.|.:.:|....||..|.||:|||..:..|:|:...|:|.||.||::|.||:
Zfish   258 VTLPGAKEGILFYITPDFEKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYRDSIIV 322

  Fly   342 TTIDSLTSILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFF 406
            ..|:|.||:.||.:||.|:|.::..|. :.|:.|...|.||||::||||:.:....| |:|:|||
Zfish   323 CCINSFTSMFAGFVIFSIVGFMSHVTK-RPIADVAASGPGLAFLAYPEAVTQLPVSP-LWAILFF 385

  Fly   407 FMLLVLGIGSNIGMASAVVNVVKDRFTHL---PHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVD 468
            .|||:|||.|........:..:.|.|..|   ...:......::.:..||..:|.||.:|..|.|
Zfish   386 SMLLMLGIDSQFCTVEGFITALVDEFPRLLRKRREIFIACVCVVSYAIGLSNITQGGLYVFKLFD 450

  Fly   469 FYGCTFIALV-LAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYML 532
            :|..:.:.|: |...|.:::.|.|||.:...:|:.|:..|...:|::||....|.::..|.::..
Zfish   451 YYSASGMCLLFLVFFECISISWCYGVNKFYDNIQEMIGYKPCIWWKLCWVFFTPLVVAGVFLFSA 515

  Fly   533 FSYEPLTYRGVQYPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPG----------KTFGSKFGLA 587
            ....|||.....:|.         ||.||..|  .||.::...||          .|:..:..:.
Zfish   516 VQMVPLTMNNYVFPK---------WGQGVGWL--MALSSMVLIPGYMGYMFLNLKGTYKERIRIM 569

  Fly   588 MQPTA-----NWGPLQTQ 600
            :||.|     ..||.|.|
Zfish   570 LQPPAVKRAQENGPEQQQ 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 163/478 (34%)
slc6a1aNP_001038752.2 SLC5-6-like_sbd 2..588 CDD:294310 194/603 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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