DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and SLC6A4

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001036.1 Gene:SLC6A4 / 6532 HGNCID:11050 Length:630 Species:Homo sapiens


Alignment Length:24 Identity:10/24 - (41%)
Similarity:12/24 - (50%) Gaps:0/24 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 NIVTASTIPKYKTMPSPTRSNAIL 650
            :.||..||..|..|..|.:.|.||
Human   299 DFVTDDTISPYSRMKRPPKGNEIL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359
SLC6A4NP_001036.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..59
5HT_transport_N 24..64 CDD:397524
SLC6sbd_SERT 79..615 CDD:271399 10/24 (42%)
Interaction with RAB4A 616..624
Blue background indicates that the domain is not in the aligned region.

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