DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a17

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:645 Identity:187/645 - (28%)
Similarity:305/645 - (47%) Gaps:123/645 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDDAEYQKLRRNMQGAQGSREGHPGSNDGISTVIYSAEGEELTINCEAESESSGQRDQWSRGVE 65
            :::..:|::...|:.|..|.::              ....|||    :||     .|..|:..::
  Rat    27 LEEPVDYKQSVLNVAGETGGKQ--------------KVAEEEL----DAE-----DRPAWNSKLQ 68

  Fly    66 FLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFD 130
            ::.:.|..||||||:||||::..:|||||:|:||:::|::||.|:::||:.:||...||.|..:.
  Rat    69 YILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVGQRIRRGSIGVWH 133

  Fly   131 -MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATGATAAN 194
             :.|.:.||.:...........||..|:..::.|...||...|||:.|.|      :..|..|..
  Rat   134 YVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWSECPV------IRNGTVAVV 192

  Fly   195 DSSIVQGVSSAELFFTQTVLREPESLD-DNGL---GTPSWDLVLCLLATWVIIGTILSKGIRSSG 255
            :....:  |||..:|...     |:|| .|.:   |..:|.:.:|||..|.|:|..:.|||:|||
  Rat   193 EPECEK--SSATTYFWYR-----EALDISNSISESGGLNWKMTVCLLVAWSIVGMAVVKGIQSSG 250

  Fly   256 KASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGT 320
            |..||.:|||||::...|:|.:.|.||..||::...|:..::|:|.||..|.||:||:|.:.||.
  Rat   251 KVMYFSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGG 315

  Fly   321 LVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETN----------------- 368
            ::.::|:|..:.|.|.|..:::.|:..||:||..::|.:||   |:.|                 
  Rat   316 VIAFSSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLG---FKANIMNEKCVVENAEKILGY 377

  Fly   369 ---------------------TKDISQV------VK----------------------GGAGLAF 384
                                 |||.|::      ||                      .|.||||
  Rat   378 LNSNVLSRDLIPPHVNFSHLTTKDYSEMYNVIMTVKEKQFSALGLDPCLLEDELDKSVQGTGLAF 442

  Fly   385 ISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFTHLPHWLLAVSASIIGF 449
            |::.||:..|...| .::|:||.||:.||:||.||..:.:...:.|.| .:|..:..|...:..|
  Rat   443 IAFTEAMTHFPASP-FWSVMFFLMLINLGLGSMIGTMAGITTPIIDTF-KVPKEMFTVGCCVFAF 505

  Fly   450 LCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRI 514
            ..||:::...|.:.:.:.|.|..|....|:.|.|.:||.||||.|:...::..||..:...::..
  Rat   506 FVGLLFVQRSGNYFVTMFDDYSATLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFY 570

  Fly   515 CWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLG--VLQLPFWALVTI 572
            .|..|:|      |...:.:...:...||. ||.|  :.||.....  .|..|.||:..:
  Rat   571 MWKFVSP------LCMAVLTTASIIQLGVS-PPGY--SAWIKEEAAERYLYFPNWAMALL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 166/544 (31%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 178/589 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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