DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and si:ch211-132b12.2

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001038688.1 Gene:si:ch211-132b12.2 / 571877 ZFINID:ZDB-GENE-050420-178 Length:582 Species:Danio rerio


Alignment Length:574 Identity:191/574 - (33%)
Similarity:314/574 - (54%) Gaps:25/574 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQF 120
            :|..|....||:.:...:.:|||||||||::..:|||||||:||::.::..|.|::.||..:||:
Zfish    10 ERGNWGSKTEFILAVAGIVIGLGNVWRFPYLCYKNGGGAFLVPYLVFVVTCGVPLFLLETAMGQY 74

  Fly   121 SSRGCIRAFD-MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG-K 183
            :..|.|..:. :.|:..||.|........:..||..|:|..:.||..|||..|||..|...|. .
Zfish    75 TQEGGITCWHRLCPLAEGIGYAGQLIVLYSCMYYIIILAWALFYLAFSFSSQLPWASCDNIWNTD 139

  Fly   184 SCVATGATAANDSS--IVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTI 246
            :||.......|.|:  ::...||...|:...||.....::.  :|..:|:::|||:..|:|....
Zfish   140 ACVNLAENKLNLSTPMLLNSTSSVTEFWQHRVLALSGGIEK--VGKINWEILLCLIVMWIICYFC 202

  Fly   247 LSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMF 311
            :.||::|:||..||.|.||||:::|||||.:|||||.||:|::|.|:.::|.:|.||..|..|:|
Zfish   203 VWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPARLADPQVWMEAGAQIF 267

  Fly   312 FSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVV 376
            ||.|:...:|.:..|:|.:|.|.::..:.:..::|.||::||..:|.:||.:| :.....|.:|.
Zfish   268 FSYALGTASLTVLGSYNKYNYNCYRSSLWLCLLNSSTSVIAGFAVFSVLGFMA-QKQGLPIEEVA 331

  Fly   377 KGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFTHL-----P 436
            :.|.|||||:||:|:|...: |||:|..||.|:::||:.:........:..|.|.|..:     .
Zfish   332 ESGPGLAFIAYPQAVAMMPF-PQLWAACFFIMIILLGLDTQFVAMEVFMTSVIDLFPTVLRKAGR 395

  Fly   437 HWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALV-LAIAELLAVGWIYGVKRICSDI 500
            ..:..:...:..|...||.:|.||.:|..|.|:|.|:...|: |.:.|.||:||::|.:::...|
Zfish   396 REIFLLLFCLFCFFGQLVMVTEGGMYVFQLFDYYACSGACLLFLCVFESLAMGWVFGAEKMFGII 460

  Fly   501 EFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTY-RGVQYPPVYYMAGWIIWGLGVLQL 564
            |.|.|.:.::::.:||..:.|.:.....|..|..|:|||: |...||...|:.||::....:|.:
Zfish   461 EDMTNSRPNYWFMLCWKYLTPIVSLASFVCSLVKYKPLTFNRWYVYPDWAYVLGWLLALSSILLV 525

  Fly   565 PFWALVTIYQQPGKTFGSKFGLAMQPTANWGPLQTQKFEAYIIHRKREADFKSP 618
            |.|||       |:.|..|..:..:.:....|.....|...|.:::.|   |:|
Zfish   526 PGWAL-------GRMFAGKGSIKQRWSHLCSPDTNPHFACKIQNKRHE---KTP 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 165/483 (34%)
si:ch211-132b12.2NP_001038688.1 SLC6sbd-TauT-like 11..550 CDD:271387 185/549 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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