DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and si:ch211-283g2.1

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017211707.1 Gene:si:ch211-283g2.1 / 569007 ZFINID:ZDB-GENE-060531-57 Length:581 Species:Danio rerio


Alignment Length:552 Identity:200/552 - (36%)
Similarity:310/552 - (56%) Gaps:24/552 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYL 113
            |..|.:| |..|||.:||..:.|..:|||||:||||::...:||||||:||:::|:::|.|:.::
Zfish     2 AAKEEAG-RPTWSRQIEFTLAGIGCAVGLGNIWRFPYLCYRSGGGAFLLPYLLMLVVLGIPLLHM 65

  Fly   114 EVIIGQFSSRGCIRAFDMA-PIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYC 177
            |:.:||:..||.:.|...| |:.:|:....|..:.:..|||..|:...:.|:.:||...|.|..|
Zfish    66 ELTLGQYLRRGPVLALAKACPLFKGVGMATVAISFIMCTYYNIIITWALYYMFSSFRSELLWQNC 130

  Fly   178 LVEWGKSCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVI 242
            ...|.........|.::.||     ::::.||...||.....:::.  ||..|:|.|.||..|::
Zfish   131 NNTWNTVNCTDQVTNSSSSS-----TASQQFFNYKVLERTSGVEET--GTLRWELFLLLLLAWIL 188

  Fly   243 IGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAI 307
            :...:.||::|:||..||.|||||||::.|||..|.||||..||.:|:.|:|.:|||..||..|.
Zfish   189 VYLCIFKGVKSTGKVVYFTALFPYVILLALLINNVQLPGALDGIKFFIIPEWDKLLNVQVWINAA 253

  Fly   308 TQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDI 372
            .|:|.|:.|.||:|:..||:|::|.||.||.:.|...:|||||.||.:||...|.::...|. .:
Zfish   254 AQIFNSIGIGFGSLMAMASYNNYNNNVLKDTLAIAITNSLTSIFAGFVIFSAFGYMSHLQNV-PV 317

  Fly   373 SQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFT---- 433
            |::...|.||..:.||:|.......| |:|.|||||||.||:.|...|...:|..:.|.::    
Zfish   318 SEIAVDGPGLVLVVYPQAFVTMPVAP-LWAFLFFFMLLCLGLDSQFAMVEVMVTSLLDSYSKPIL 381

  Fly   434 -HLPH----WLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGV 493
             ||..    .||...|:   ||.|:..:...|.:|..|:|.|......:.||..|::.|.|.|||
Zfish   382 KHLKRKEFLVLLVCGAA---FLLGIPNVMQVGIYVFQLMDHYTAIVSIMFLAFFEVVGVCWCYGV 443

  Fly   494 KRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWG 558
            ||:.|::..|...:.|.::||||.::.|.|:.::||:.:..::|..|....|||.....||:|..
Zfish   444 KRLSSNLVEMTGKRPSIFFRICWWVICPALITVILVFSVIQFKPARYEDYVYPPWAQGVGWLIAL 508

  Fly   559 LGVLQLPFWALVTIYQQPGKTFGSKFGLAMQP 590
            ..::.:|..|:.|::..|| :|..||..::.|
Zfish   509 ASIIWIPLAAVHTLWVLPG-SFTEKFKKSITP 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 179/483 (37%)
si:ch211-283g2.1XP_017211707.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.