DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and slc6a1l

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_021330952.1 Gene:slc6a1l / 568985 ZFINID:ZDB-GENE-041210-296 Length:578 Species:Danio rerio


Alignment Length:544 Identity:174/544 - (31%)
Similarity:287/544 - (52%) Gaps:23/544 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGR 108
            :|..|.:......|..|....:||.||:..::|||||||||::..:||||||||||...|:..|.
Zfish    14 SIPVEEKENKIPDRGSWKGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFTTLVFAGI 78

  Fly   109 PVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLP 173
            |::.||..:||::|.|.:..:.:.|:|:|:....|..:.....||..|:|..:.||.:|....||
Zfish    79 PLFLLETALGQYTSVGGLGVWKLIPMMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFSSLKAELP 143

  Fly   174 WTYCLVEWGKSCVATGATAANDSSI-VQGVSSAELFFTQTVLREPESLDDNGLGTPS---WDLVL 234
            |..|...|.     |....:|.|.: ...:|||...|.:   |....| .|||..|.   |.||.
Zfish   144 WQTCDNPWN-----TDRCFSNYSLLDTTNLSSAVTEFWE---RNMHQL-TNGLEEPGELRWPLVG 199

  Fly   235 CLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLN 299
            .|..:|:::...:.||:..:||..||.|.:||.::.:|..|.||||||..|:::::.|.:::||.
Zfish   200 TLALSWILVYFSIWKGVEWTGKVVYFSATYPYFMLFILFFRGVTLPGAIDGVLFYITPNFNKLLK 264

  Fly   300 PHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLA 364
            ..||..|.||:|||..:..|:|:...|:|.||.||::|.:|:..|:|.||:.||.:||.|:|.::
Zfish   265 SEVWLDAATQIFFSYGLGLGSLIALGSYNSFNNNVYRDSVIVCCINSCTSMFAGIVIFSIVGFMS 329

  Fly   365 FETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVK 429
            :.|. :.|.::...|.||||::||:|:.:.. :..|:|:|||.||::||:.|........:..:.
Zfish   330 YITK-RPIEELAASGPGLAFLAYPQAVTQLP-MSSLWAILFFSMLMMLGLDSQFCTVEGFITALM 392

  Fly   430 DRFTHLPH-----WLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALV-LAIAELLAVG 488
            |.:..:..     ::|.|  .::.|:.|...:|.||.:|..|.|:|..:.:.|: |...|.:::.
Zfish   393 DEYPTVLRKRKKIFILIV--CLVSFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETISIA 455

  Fly   489 WIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAG 553
            |.||.::...:||.|:..:...:|:.||....|.:...|..:......|||.....||......|
Zfish   456 WFYGAEKFYKNIEEMIGYRPCGFWKQCWIYFTPTICLGVFTFSAIEMTPLTLGKYVYPAWGQGVG 520

  Fly   554 WIIWGLGVLQLPFWALVTIYQQPG 577
            |::....::.:|.:.:...:...|
Zfish   521 WLMSLSSMVLIPGYIIYMFFSTKG 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 162/483 (34%)
slc6a1lXP_021330952.1 SLC5-6-like_sbd 15..558 CDD:320982 174/543 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.