DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and slc6a8

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001314797.1 Gene:slc6a8 / 567544 ZFINID:ZDB-GENE-071024-2 Length:652 Species:Danio rerio


Alignment Length:596 Identity:211/596 - (35%)
Similarity:330/596 - (55%) Gaps:34/596 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HPGSNDGISTVIYSAEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIAL 88
            ||..|..::....||....::. .|.:.|...:|:.|:|.::|:.||:..:||||||||||::..
Zfish    32 HPSVNGTLNGGPMSAATGAISA-VEKKREGYPERETWTRQMDFIMSCVGFAVGLGNVWRFPYLCY 95

  Fly    89 ENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYY 153
            :||||.||||||:.:.|.|.|:::||:.:|||...|.|..:::||:.:|:.|..:.......|||
Zfish    96 KNGGGVFLIPYVLFIFLGGIPIFFLEIALGQFMKAGSINVWNIAPLFKGLGYASMVIVFFCNTYY 160

  Fly   154 ACIMALTIRYLVASFSEVLPWTYCLVEWG-KSCV-------ATGATAANDS-------SIVQGVS 203
            ..::|....|.:.||:..|||:.|...|. ::|:       ....|..|.:       .:..|.|
Zfish   161 IMVLAWGFYYFIKSFNATLPWSTCDNPWNTENCIEIFRQGDCKNGTIGNSTFGNLTCEELANGRS 225

  Fly   204 SAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVI 268
            ....|:...||...:.||:.  |..:|:|:|||||.||::...:.||::|:||..||.|.||||:
Zfish   226 PIIEFWENKVLNISDGLDEP--GAVNWELMLCLLAVWVMVYFCVWKGVKSTGKIVYFTATFPYVV 288

  Fly   269 MIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKN 333
            :|:||:|.||||||:.||:|::||.||:|....||..|.||:|||.||..|.|....|:|.||.:
Zfish   289 LIILLVRGVTLPGAYDGILYYVKPDWSKLGEAQVWIDAGTQIFFSYAIGLGALTALGSYNRFNND 353

  Fly   334 VHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLP 398
            .:||..::..|:|.||..||.::|.|||.:|.|... |||:|.:.|.|||||:||:|::.....|
Zfish   354 CYKDAFVLALINSGTSFFAGFVVFSILGFMASEQGV-DISKVAESGPGLAFIAYPKAVSMMPVAP 417

  Fly   399 QLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRF--THLPHWLLAVSASIIGFLCGLV---YMTP 458
             ::|.|||.|||:||:.|........|..:.|.|  .:...:...::.:|...||.::   .:|.
Zfish   418 -VWAALFFIMLLLLGLDSQFVGVEGFVTGILDLFPGKYYMRYQREIAVAICCLLCFIIDLSMVTQ 481

  Fly   459 GGQFVLNLVDFYGCTFIALV-LAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPG 522
            ||.:|..|.|:|..:.:.|: .|..|.:.|.|:||..|...||..|:..:...:.:.||:|:.|.
Zfish   482 GGMYVFQLFDYYSASGMTLLWQAFWECVVVAWVYGADRFMDDIARMIGYRPFPWMKWCWSIITPC 546

  Fly   523 LMFLVLVYMLFSYEPLTYRGVQ-YPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGK--TFGSKF 584
            :...:.::.|.:|:||||..|. ||....:.||.:....:|.:|   :..:|:..|.  ||..::
Zfish   547 VCMGIFLFHLLNYKPLTYNNVYVYPWWGEVIGWCLALSSMLCIP---VSLVYKLSGAKGTFKERW 608

  Fly   585 GLAMQPTANWG 595
            ....:|.  ||
Zfish   609 ENLTKPV--WG 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 183/494 (37%)
slc6a8NP_001314797.1 SLC6sbd_CT1 64..652 CDD:271397 204/563 (36%)

Return to query results.
Submit another query.