DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a8

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001314797.1 Gene:slc6a8 / 567544 ZFINID:ZDB-GENE-071024-2 Length:652 Species:Danio rerio


Alignment Length:596 Identity:211/596 - (35%)
Similarity:330/596 - (55%) Gaps:34/596 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HPGSNDGISTVIYSAEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIAL 88
            ||..|..::....||....::. .|.:.|...:|:.|:|.::|:.||:..:||||||||||::..
Zfish    32 HPSVNGTLNGGPMSAATGAISA-VEKKREGYPERETWTRQMDFIMSCVGFAVGLGNVWRFPYLCY 95

  Fly    89 ENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYY 153
            :||||.||||||:.:.|.|.|:::||:.:|||...|.|..:::||:.:|:.|..:.......|||
Zfish    96 KNGGGVFLIPYVLFIFLGGIPIFFLEIALGQFMKAGSINVWNIAPLFKGLGYASMVIVFFCNTYY 160

  Fly   154 ACIMALTIRYLVASFSEVLPWTYCLVEWG-KSCV-------ATGATAANDS-------SIVQGVS 203
            ..::|....|.:.||:..|||:.|...|. ::|:       ....|..|.:       .:..|.|
Zfish   161 IMVLAWGFYYFIKSFNATLPWSTCDNPWNTENCIEIFRQGDCKNGTIGNSTFGNLTCEELANGRS 225

  Fly   204 SAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVI 268
            ....|:...||...:.||:.  |..:|:|:|||||.||::...:.||::|:||..||.|.||||:
Zfish   226 PIIEFWENKVLNISDGLDEP--GAVNWELMLCLLAVWVMVYFCVWKGVKSTGKIVYFTATFPYVV 288

  Fly   269 MIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKN 333
            :|:||:|.||||||:.||:|::||.||:|....||..|.||:|||.||..|.|....|:|.||.:
Zfish   289 LIILLVRGVTLPGAYDGILYYVKPDWSKLGEAQVWIDAGTQIFFSYAIGLGALTALGSYNRFNND 353

  Fly   334 VHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLP 398
            .:||..::..|:|.||..||.::|.|||.:|.|... |||:|.:.|.|||||:||:|::.....|
Zfish   354 CYKDAFVLALINSGTSFFAGFVVFSILGFMASEQGV-DISKVAESGPGLAFIAYPKAVSMMPVAP 417

  Fly   399 QLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRF--THLPHWLLAVSASIIGFLCGLV---YMTP 458
             ::|.|||.|||:||:.|........|..:.|.|  .:...:...::.:|...||.::   .:|.
Zfish   418 -VWAALFFIMLLLLGLDSQFVGVEGFVTGILDLFPGKYYMRYQREIAVAICCLLCFIIDLSMVTQ 481

  Fly   459 GGQFVLNLVDFYGCTFIALV-LAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPG 522
            ||.:|..|.|:|..:.:.|: .|..|.:.|.|:||..|...||..|:..:...:.:.||:|:.|.
Zfish   482 GGMYVFQLFDYYSASGMTLLWQAFWECVVVAWVYGADRFMDDIARMIGYRPFPWMKWCWSIITPC 546

  Fly   523 LMFLVLVYMLFSYEPLTYRGVQ-YPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGK--TFGSKF 584
            :...:.::.|.:|:||||..|. ||....:.||.:....:|.:|   :..:|:..|.  ||..::
Zfish   547 VCMGIFLFHLLNYKPLTYNNVYVYPWWGEVIGWCLALSSMLCIP---VSLVYKLSGAKGTFKERW 608

  Fly   585 GLAMQPTANWG 595
            ....:|.  ||
Zfish   609 ENLTKPV--WG 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 183/494 (37%)
slc6a8NP_001314797.1 SLC6sbd_CT1 64..652 CDD:271397 204/563 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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