DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and slc6a16a

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_021327051.1 Gene:slc6a16a / 555229 ZFINID:ZDB-GENE-061009-43 Length:693 Species:Danio rerio


Alignment Length:630 Identity:188/630 - (29%)
Similarity:299/630 - (47%) Gaps:110/630 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EGHPGSNDGISTVIYSAEGEELTINCEAESE--SSGQRDQ---WSRGVEFLFSCIALSVGLGNVW 81
            |..|..:|...:|:..:..:...::.:.|..  :.||.|.   |...::::.:.:..||||||||
Zfish     2 EKPPLPSDENGSVLTESRSDMALVSADDEGSAGADGQEDDRPAWDSKLQYVLAQVGFSVGLGNVW 66

  Fly    82 RFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYS 145
            |||::..:||||||::.||::||:||.|::::|:..||...:|.|..: .::|.:.||.|.....
Zfish    67 RFPYLCHQNGGGAFMLLYVMLLLIIGVPLFFMELAAGQSIRQGSIGVWKHISPRLAGIGYSSCMV 131

  Fly   146 TALATTYYACIMALTIRYLVASFSEVLPWTYCLVEW-----GKSCVATGATAANDSSIVQGVSSA 205
            ......||..|:|.::.|:..||...|||..|.|:.     .|.|.|:..|:             
Zfish   132 CFFVALYYNVIIAWSLFYMGNSFQYPLPWEQCPVDMISNQTVKECAASSPTS------------- 183

  Fly   206 ELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMI 270
             .|:.:..|...:|:|.:|...|.  :..||||.|.|:...:.|||:||.|..||.::|||.::|
Zfish   184 -YFWFRKALDISDSIDQSGEFNPI--MTGCLLAAWAIVCLAMIKGIKSSAKVMYFSSVFPYAVLI 245

  Fly   271 VLLIRAVTLPGAWQGIVYFLKPQ---WSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNK 332
            ..|||.:.|.||..||.|...|:   |.::   .||..|.||:||:|.:.:|:::.|:|:|..:.
Zfish   246 CFLIRGLMLDGAIDGIKYMFYPKVEIWGEV---QVWRQAATQVFFALGLGYGSVIAYSSYNPIHN 307

  Fly   333 NVHKDVIIITTIDSLTSILAGCIIFGILG----NLAFET------------------------NT 369
            |.|:|.|:::.|:.:||:||..::|.:||    |:|.:.                        |.
Zfish   308 NCHRDAIMVSGINFMTSVLASLVVFVVLGFRAKNIALDCVATNVARMAEMAQTGSSQHWRPLFNM 372

  Fly   370 KDISQVV-----------------------------KG--GAGLAFISYPEAIAKFKYLPQLFAV 403
            .|...||                             ||  |.|||||::.||:|.|...| .::.
Zfish   373 SDPKSVVLQDYRQWYSSYGSLLGSNITDCDLEREMSKGVEGTGLAFIAFTEAMALFPASP-FWST 436

  Fly   404 LFFFMLLVLGIGSNIGMASAVVNVVKDRFTHLPH--WLLAVSASIIGFLCGLVYMTPGGQFVLNL 466
            |||.|||.||:.:..|....::..:.|.|..|..  .:|.|.:.|:|||.||::....|.:.:.:
Zfish   437 LFFLMLLNLGLSTMFGTMQGILTPLMDNFRVLGRHKTMLTVCSCILGFLIGLLFTQRSGNYFVTM 501

  Fly   467 VDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVA----PGLMFLV 527
            .|.|..|...:::.|.|.::|.||||..|...|:|.||:.:....:|..|..|.    .||:...
Zfish   502 FDDYSATLPLIIVVIFETVSVAWIYGADRFLDDVEVMLHWRPPVVYRYLWKYVCLLGMVGLLAAS 566

  Fly   528 LVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLGVLQLPFWALVTI 572
            |:.|:|.           .|.|............|:.|.||||.:
Zfish   567 LLRMVFK-----------RPTYTAWNHTTGSEASLEYPGWALVVL 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 171/550 (31%)
slc6a16aXP_021327051.1 SLC6sbd-B0AT-like 42..617 CDD:271364 180/590 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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