DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and RGD1562492

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001102616.1 Gene:RGD1562492 / 499151 RGDID:1562492 Length:743 Species:Rattus norvegicus


Alignment Length:624 Identity:152/624 - (24%)
Similarity:276/624 - (44%) Gaps:124/624 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGC 125
            ::..|.:...:|.|:|||:.||||::..:||||:||:.|:|:|||:|.|:.|:|::|||:.....
  Rat    53 AKKTENILILVAFSIGLGSTWRFPYLCHQNGGGSFLLMYLILLLLLGIPLMYMEMVIGQWLRVDN 117

  Fly   126 IRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATG 189
            |||: .:.|.:.|:.|..:.:.||...|.:.:::.::.||..||....||        ::|....
  Rat   118 IRAWKHLVPWLSGVGYSSMLACALVILYNSALVSWSLFYLGQSFDYPTPW--------ENCPLVK 174

  Fly   190 ATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSS 254
            ..:.:|.|.:: ....:.|:..||||..:.::: |:.....::.|||.|||..:...:...|:.|
  Rat   175 NFSTSDISCLR-TEPHQFFWYHTVLRASDQIEE-GIEVLVLNVTLCLFATWFFLYITMVTRIKIS 237

  Fly   255 GKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFG 319
            .....|..|||.|::.........:.|....:...:..:.|.|.:...|..|...:.:||.:..|
  Rat   238 VLMMIFSILFPNVLLFCFFTHIFFVKGVRDSLKRLVTTELSILASLDAWRQAGGHVLYSLGLGMG 302

  Fly   320 TLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGIL-------GNLAFETNT-------- 369
            |::.::|:....:|..|....:..::.:||:|:..:||.:|       |....|:|.        
  Rat   303 TIITFSSYQTRGENYIKWASFVAMVNLMTSLLSSSVIFLMLGFWIENSGTPCVESNVSNLLSLIA 367

  Fly   370 -----------KD------------ISQVVKG-----------------------GAGLAFISYP 388
                       ||            |||:.|.                       |.|||::::.
  Rat   368 NGVLPQVAWPPKDIIHRSPLEYLDWISQLPKNIRNEVAHFTLPCSILVQKEKFMEGPGLAYVAFS 432

  Fly   389 EAIAKFKYLP--QLFAVLFFFMLLVLGIGSNIGMASAV-VNVVKDRFTHLPH-WLLAVSASIIGF 449
            :||..|   |  ..:|::||..|:::|:|:...:...: :::.|...|...| .|:.|...:.||
  Rat   433 QAITLF---PGSSFWAIIFFMSLVIMGLGTMTTLVEGIALSLQKSISTLEKHPKLVPVIICLGGF 494

  Fly   450 LCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRI 514
            |..||:.:..|.:|:.|.|.:....:.:::...:.|::.|:||:||..:::...|.       |:
  Rat   495 LGSLVFSSRPGSYVVFLFDDHLVPMVLIMIVAFQNLSLAWVYGIKRFRAEMFGQLG-------RL 552

  Fly   515 CWA--------IVAPGLMFLVLVYMLFSY--EPLTY--------RGVQYPPVYYMAGWIIWGLGV 561
            .||        :..|.|:.|:.:|.|..|  |.|:|        :.|:.|......||:.: |.|
  Rat   553 VWAPFTFLWSYVTLPTLLVLLTIYFLNLYFSESLSYVSWNNSMSQEVKQPYQRIALGWVTF-LSV 616

  Fly   562 LQLPFWALVTIYQQPGKTFGSKFGLAMQPTANWGPLQTQ 600
            |.|                   ..:.|.|..:|..|..|
  Rat   617 LAL-------------------LPIPMYPLQHWWYLDDQ 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 134/544 (25%)
RGD1562492NP_001102616.1 SLC5-6-like_sbd 50..621 CDD:382020 147/607 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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