DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a5

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001009557.1 Gene:slc6a5 / 494450 ZFINID:ZDB-GENE-050105-2 Length:786 Species:Danio rerio


Alignment Length:638 Identity:220/638 - (34%)
Similarity:337/638 - (52%) Gaps:65/638 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GAQGSREGHPGSNDGIST----VIYSAEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVG 76
            |..|:....||:..|..|    .::..:.::     :...|:.. |..||..::|:.|.:..:||
Zfish   138 GTDGNTSVLPGTVTGPPTDDTGRLFQDDDDD-----DGGDENKA-RGNWSNKLDFILSMVGYAVG 196

  Fly    77 LGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYG 141
            ||||||||::|.:||||||||||:|:|.|.|.|::.|||.:|||:|:|.:..:...|.::|....
Zfish   197 LGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQGCGIA 261

  Fly   142 QVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG------------KSCV-------- 186
            .:..:.|...||..||..|:.||.||..|.|||..|..||.            .:|:        
Zfish   262 MLIISVLIAIYYNIIMCWTLYYLFASLKETLPWATCKNEWNTVECKDKDMLLLDTCILRDRNITS 326

  Fly   187 ---ATGATAANDSSIVQG---------------VSSAELFFTQTVLREPESLDDNGLGTPSWDLV 233
               .|...:||    |.|               ||.:|.:|...||...:.::..  |...|.|.
Zfish   327 IKNTTFCLSAN----VVGNLSKLLNVTVDNKTYVSPSEEYFKYNVLHISKGIEYP--GDIRWPLA 385

  Fly   234 LCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLL 298
            .||...|:|:...|:|||:||||..||.|.||||::::||||.||||||..||:||:.|:|.:|.
Zfish   386 ACLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFITPKWEKLN 450

  Fly   299 NPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNL 363
            :..||..|.||:||||:..:|.|:..:|:|.|:.|.::|.:|:|..:|.|||.||.:||.::|.:
Zfish   451 DAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFM 515

  Fly   364 AFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVV 428
            |.|... .|..|...|.|:||:.||||:.:....| .:|::||.|||.||:.:.......:|..|
Zfish   516 AHELKV-PIESVADEGPGIAFVVYPEALTRLPLSP-FWAIIFFLMLLTLGLDTMFATIETIVTSV 578

  Fly   429 KDRF-----THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVG 488
            .|.|     .|.|.:.|....|.  |:.|...:|..|.::|.|||.:..::..:::||.||:.:.
Zfish   579 SDEFPKYLRKHKPQFTLVCCLSF--FVLGFPMITESGMYMLQLVDTFAASYSLVIIAIFELVGIS 641

  Fly   489 WIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAG 553
            :|||::|.|.|||.|:..:.:.:||:|||.|.|.::..:|...|:.::.:||....||....:.|
Zfish   642 YIYGLQRFCEDIEMMIGFQPNKFWRVCWAFVTPTILTFILALSLYQWKVMTYEDYTYPNWSMVLG 706

  Fly   554 WIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQPTANWGP-LQTQKFEAY 605
            |::....|:.:|....:.::..||... .:..|...|..:||| |...:.|.|
Zfish   707 WLMVICSVIWIPIMFAIKMHLAPGSLI-ERLKLVCSPQPDWGPFLMKHRGERY 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 193/516 (37%)
slc6a5NP_001009557.1 SLC5-6-like_sbd 177..775 CDD:294310 213/593 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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