DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a5

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001009557.1 Gene:slc6a5 / 494450 ZFINID:ZDB-GENE-050105-2 Length:786 Species:Danio rerio


Alignment Length:638 Identity:220/638 - (34%)
Similarity:337/638 - (52%) Gaps:65/638 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GAQGSREGHPGSNDGIST----VIYSAEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVG 76
            |..|:....||:..|..|    .::..:.::     :...|:.. |..||..::|:.|.:..:||
Zfish   138 GTDGNTSVLPGTVTGPPTDDTGRLFQDDDDD-----DGGDENKA-RGNWSNKLDFILSMVGYAVG 196

  Fly    77 LGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYG 141
            ||||||||::|.:||||||||||:|:|.|.|.|::.|||.:|||:|:|.:..:...|.::|....
Zfish   197 LGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQGCGIA 261

  Fly   142 QVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG------------KSCV-------- 186
            .:..:.|...||..||..|:.||.||..|.|||..|..||.            .:|:        
Zfish   262 MLIISVLIAIYYNIIMCWTLYYLFASLKETLPWATCKNEWNTVECKDKDMLLLDTCILRDRNITS 326

  Fly   187 ---ATGATAANDSSIVQG---------------VSSAELFFTQTVLREPESLDDNGLGTPSWDLV 233
               .|...:||    |.|               ||.:|.:|...||...:.::..  |...|.|.
Zfish   327 IKNTTFCLSAN----VVGNLSKLLNVTVDNKTYVSPSEEYFKYNVLHISKGIEYP--GDIRWPLA 385

  Fly   234 LCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLL 298
            .||...|:|:...|:|||:||||..||.|.||||::::||||.||||||..||:||:.|:|.:|.
Zfish   386 ACLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFITPKWEKLN 450

  Fly   299 NPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNL 363
            :..||..|.||:||||:..:|.|:..:|:|.|:.|.::|.:|:|..:|.|||.||.:||.::|.:
Zfish   451 DAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFM 515

  Fly   364 AFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVV 428
            |.|... .|..|...|.|:||:.||||:.:....| .:|::||.|||.||:.:.......:|..|
Zfish   516 AHELKV-PIESVADEGPGIAFVVYPEALTRLPLSP-FWAIIFFLMLLTLGLDTMFATIETIVTSV 578

  Fly   429 KDRF-----THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVG 488
            .|.|     .|.|.:.|....|.  |:.|...:|..|.::|.|||.:..::..:::||.||:.:.
Zfish   579 SDEFPKYLRKHKPQFTLVCCLSF--FVLGFPMITESGMYMLQLVDTFAASYSLVIIAIFELVGIS 641

  Fly   489 WIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAG 553
            :|||::|.|.|||.|:..:.:.:||:|||.|.|.::..:|...|:.::.:||....||....:.|
Zfish   642 YIYGLQRFCEDIEMMIGFQPNKFWRVCWAFVTPTILTFILALSLYQWKVMTYEDYTYPNWSMVLG 706

  Fly   554 WIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQPTANWGP-LQTQKFEAY 605
            |::....|:.:|....:.::..||... .:..|...|..:||| |...:.|.|
Zfish   707 WLMVICSVIWIPIMFAIKMHLAPGSLI-ERLKLVCSPQPDWGPFLMKHRGERY 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 193/516 (37%)
slc6a5NP_001009557.1 SLC5-6-like_sbd 177..775 CDD:444915 213/593 (36%)

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