DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and SLC6A17

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001010898.1 Gene:SLC6A17 / 388662 HGNCID:31399 Length:727 Species:Homo sapiens


Alignment Length:638 Identity:189/638 - (29%)
Similarity:310/638 - (48%) Gaps:109/638 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDDAEYQKLRRNMQGAQGSREGHPGSNDGISTVIYSAEGEELTINCEAESESSGQRDQWSRGVE 65
            :::..:|::...|:.|..|.::              .|..|||    :||     .|..|:..::
Human    27 LEEPVDYKQSVLNVAGEAGGKQ--------------KAVEEEL----DAE-----DRPAWNSKLQ 68

  Fly    66 FLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFD 130
            ::.:.|..||||||:||||::..:|||||:|:||:::|::||.|:::||:.:||...||.|..:.
Human    69 YILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVGQRIRRGSIGVWH 133

  Fly   131 -MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATGATAAN 194
             :.|.:.||.:...........||..|:..:|.|...||...|||:.|.|      |..|:.|..
Human   134 YICPRLGGIGFSSCIVCLFVGLYYNVIIGWSIFYFFKSFQYPLPWSECPV------VRNGSVAVV 192

  Fly   195 DSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASY 259
            ::...:. |:...|:.:..|...:|:.::| |. :|.:.||||..|.|:|..:.|||:||||..|
Human   193 EAECEKS-SATTYFWYREALDISDSISESG-GL-NWKMTLCLLVAWSIVGMAVVKGIQSSGKVMY 254

  Fly   260 FLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMY 324
            |.:|||||::...|:|.:.|.||..||::...|:..::|:|.||..|.||:||:|.:.||.::.:
Human   255 FSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIAF 319

  Fly   325 ASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILG---NLAFE---------------TN--- 368
            :|:|..:.|.|.|..:::.|:..||:||..::|.:||   |:..|               ||   
Human   320 SSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNTNVLS 384

  Fly   369 --------------TKD------ISQVVK----------------------GGAGLAFISYPEAI 391
                          |||      :...||                      .|.|||||::.||:
Human   385 RDLIPPHVNFSHLTTKDYMEMYNVIMTVKEDQFSALGLDPCLLEDELDKSVQGTGLAFIAFTEAM 449

  Fly   392 AKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFTHLPHWLLAVSASIIGFLCGLVYM 456
            ..|...| .::|:||.||:.||:||.||..:.:...:.|.| .:|..:..|...:..||.||:::
Human   450 THFPASP-FWSVMFFLMLINLGLGSMIGTMAGITTPIIDTF-KVPKEMFTVGCCVFAFLVGLLFV 512

  Fly   457 TPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAP 521
            ...|.:.:.:.|.|..|....::.|.|.:||.||||.|:...::..||..:...::...|..|:|
Human   513 QRSGNYFVTMFDDYSATLPLTLIVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFYMWKFVSP 577

  Fly   522 GLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLG--VLQLPFWALVTI 572
                  |...:.:...:...||. ||.|  :.||.....  .|..|.||:..:
Human   578 ------LCMAVLTTASIIQLGVT-PPGY--SAWIKEEAAERYLYFPNWAMALL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 167/537 (31%)
SLC6A17NP_001010898.1 SLC6sbd_NTT4 60..648 CDD:271403 179/582 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.