DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a19b

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:608 Identity:174/608 - (28%)
Similarity:294/608 - (48%) Gaps:104/608 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EELTINCEA----ESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVI 101
            ||..:|.||    |.|.:|.|.:|....:::.:|:...||||||||||::...:|||||:||::|
Zfish    13 EERILNHEALERLEVEEAGDRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLI 77

  Fly   102 VLLLIGRPVYYLEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLV 165
            :|:..|.|:.:||..|||...:|.:..: .:.|.|.|:....:..:.|.:.||..|:|..:.|..
Zfish    78 LLVFEGIPLLHLEFAIGQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFF 142

  Fly   166 ASFSEVLPWTYC---------LVEWGKSCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLD 221
            .||.:.|||:.|         :.|.|||                  |..:.|:.:..|....::|
Zfish   143 NSFQDPLPWSQCPINENRTGPIPECGKS------------------SPVDYFWYRETLNTSAAID 189

  Fly   222 DNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGI 286
            |.| |...| :||||::.|.::.....:||.::|||.|..:..||:::.:.|||.:||.|:..||
Zfish   190 DTG-GLQVW-MVLCLISAWAVLYVCCIRGIETTGKAVYVTSTLPYLVLTIFLIRGLTLKGSVDGI 252

  Fly   287 VYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSIL 351
            .:...|..::|.||..|..|..|:|:|.::.||.|:.::|:|..:.|..:|.:||:.|::.|||.
Zfish   253 KFLFTPDINELANPSTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIY 317

  Fly   352 AGCIIFGILGNLAFE--------------------------TNTKDISQVVKG------------ 378
            |..:|:.|:|..|.|                          :|.:|:.|.:..            
Zfish   318 AATVIYSIIGFRATERFDDCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLK 382

  Fly   379 -------------GAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKD 430
                         |.|||||.:.|||.|....| |::||||.||..||:.|..|....|:..::|
Zfish   383 TCDLNNFLSEGVEGTGLAFIVFTEAITKMPLSP-LWSVLFFIMLFCLGLSSMFGNIEGVLVPLQD 446

  Fly   431 RFTHLPHWLLAVSASIIGFLC---GLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYG 492
            .......|...:.:.:...:|   ||:::...|.:.|.|.|.:..:...|::|.:|::.|.::||
Zfish   447 LGVFPKSWPKEIISGVTCLVCCLVGLIFVQGSGNYWLALFDSFAGSIPLLIIAFSEMIGVVYVYG 511

  Fly   493 VKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYM--------LF--SYEP-----LTYRG 542
            :.|...|:.||:..|.:.:|:..|..::|.:|..:.|:.        :|  :::|     .|...
Zfish   512 IDRFNEDLIFMIGHKPNIFWQATWRFISPLIMLAIFVFYFSTTVTKEIFYSAWDPESENFPTLEK 576

  Fly   543 VQYPPVYYMAGWIIWGLGVLQLP 565
            ..||...|:..:::.|:..|.:|
Zfish   577 KPYPTWIYVIIFLLAGVPSLAVP 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 156/545 (29%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 166/588 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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