DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and CG31904

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster


Alignment Length:162 Identity:49/162 - (30%)
Similarity:72/162 - (44%) Gaps:17/162 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RDQWSRGVEFLF-SCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQF 120
            |.:|::..:|.| ||......|.......|..|..|...|:|.|::.:|....|::.::..:|||
  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFLIQAFLGQF 148

  Fly   121 SSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG-KS 184
            ||.|.|.||.:|||.:||.|..:.......|||:....:.:.|.|.|...|:||..|...|. :.
  Fly   149 SSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQE 213

  Fly   185 C-----------VATGATAANDSSIVQGVSSA 205
            |           ||...|.|    :..||.|:
  Fly   214 CSLHENYDVDFAVAVIFTLA----LAMGVQSS 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 48/161 (30%)
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:444915 39/123 (32%)
Cuticle_4 276..344 CDD:464954
Blue background indicates that the domain is not in the aligned region.

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