DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a18

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_063141398.1 Gene:Slc6a18 / 29323 RGDID:69352 Length:642 Species:Rattus norvegicus


Alignment Length:676 Identity:191/676 - (28%)
Similarity:306/676 - (45%) Gaps:156/676 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIV 102
            |.|.:..::.|.|      |.:|...:::|.|||..:|||||:||||::...:|||||||||.|.
  Rat     4 ASGMDPLVDIEDE------RPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCHTHGGGAFLIPYFIA 62

  Fly   103 LLLIGRPVYYLEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVA 166
            |:..|.|::|:|:.|||...||.|..: .::|.:.|:..|....:.|.:.||..|:...:.:.:.
  Rat    63 LVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTILLWVLWFFLN 127

  Fly   167 SFSEVLPWTYCLVEWGKS-----CVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLG 226
            ||...|||:.|.::..::     |.::|..             :..::.||:   ..:.|.:..|
  Rat   128 SFQHPLPWSTCPLDLNRTGFVQECQSSGTV-------------SYFWYRQTL---NITSDISNTG 176

  Fly   227 TPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLK 291
            |..|.|.|||:|.|..:...:.:||.|:||..||.|||||:::.:.|||.:|||||.:|:.|...
  Rat   177 TIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFT 241

  Fly   292 PQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCII 356
            |....|.||.||..|.||:||||::.||..:.:||:|....|..||.:.|..::|:||:.|...|
  Rat   242 PNMKILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNQPRNNCEKDAVTIALVNSMTSLYASITI 306

  Fly   357 FGILG-------------------------------NLAFETNTKDISQVVK------------- 377
            |.|:|                               :|||..:.::|..::.             
  Rat   307 FSIMGFKASNDYGRCLDRTFLEHWNICWIIEHPVPSSLAFSCSCRNILSLINEFDFPELSISRDE 371

  Fly   378 ----------------------------------GGAGLAFISYPEAIAKFKYLP--QLFAVLFF 406
                                              .|.|||||.:.||:.   ::|  .:::||||
  Rat   372 YPSVLMYLNATQPERVARLPLKTCHLEDFLDKSASGPGLAFIVFTEAVL---HMPGASVWSVLFF 433

  Fly   407 FMLLVLGIGSNIGMASAVVNVVKDRF---THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVD 468
            .||..||:.|..|....|:..:.|..   ..:|...:......|.||..:.:....|.:.|.:.|
  Rat   434 GMLFTLGLSSMFGNMEGVITPLFDMGILPKGVPKETMTGVVCFICFLSAICFTLQSGSYWLEIFD 498

  Fly   469 FYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMF-LVLVYML 532
            .:..:...::.|..|::.|..:||:||.|.|||:|...:.|.||::.|.:|:|.|:| :.|.|::
  Rat   499 SFAASLNLIIFAFMEVVGVIHVYGIKRFCDDIEWMTGRRPSLYWQVTWRVVSPMLLFGIFLSYIV 563

  Fly   533 F-------------SYEPLTYRGVQ-YPPVYYMAGWI------------IW--GLGVLQLPFWAL 569
            .             .||....|..: ||      ||:            :|  |:.:.||.|.  
  Rat   564 LLAQSSPSYKAWNPQYEHFPSREEKLYP------GWVQVTCVLLSFLPSLWVPGIALAQLLFQ-- 620

  Fly   570 VTIYQQPGKTFGSKFGLAMQPTANWG 595
               |:|..|  .:....|::|..:.|
  Rat   621 ---YRQRWK--NTHLESALKPQESRG 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 168/563 (30%)
Slc6a18XP_063141398.1 None

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