DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a16

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_038949993.1 Gene:Slc6a16 / 292902 RGDID:1561338 Length:850 Species:Rattus norvegicus


Alignment Length:625 Identity:153/625 - (24%)
Similarity:259/625 - (41%) Gaps:116/625 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 STVIYSAE---GEELTINCEAESESSGQRDQ----WSRGVEFLFSCIALSVGLGNVWRFPFIALE 89
            ||..||.|   .:|..|.....|:.:.....    ||...|::.:.:...|....:.||....:.
  Rat   200 STTEYSMETTPKQESPIELNKTSKENSNVFPPWLLWSSKAEYILALMGYLVMPSGLLRFVTCWVH 264

  Fly    90 NGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYY 153
            .|..:|.|.|:::|..:|.|:.:||:.:||.:.:..|..: .::|...|:.|..|....:..||.
  Rat   265 KGSWSFFIAYLLMLFGLGIPLLFLEMAVGQRAQQSSIDLWKTLSPWFGGLGYSMVMVCLITNTYL 329

  Fly   154 ACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATGATAANDSSIVQGVSSAELFFTQTVLREPE 218
            ....:..:.|:...|..|:||..|.::...|..        |....|..|....::.|| |:..:
  Rat   330 NVFNSWILFYMSHIFHFVVPWDRCPLQKNSSDF--------DPECEQATSYTYFWYRQT-LKASD 385

  Fly   219 SLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTL-PGA 282
            |::|.  |.||::|.:.|...|.:|...:..||:|.||....|...||.|:|..|:|.::: .|.
  Rat   386 SIEDG--GQPSFNLAMFLFLAWCLICVFMVNGIKSLGKVLCVLLQVPYFIIICFLVRTLSMGNGI 448

  Fly   283 WQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYAS-FNDFNKNVHKDVIIITTIDS 346
            ..|:.|.|..:.:::.:..:|..|..|:.|.:.:.||.::..:| .:||| |..||..::.....
  Rat   449 GYGLNYLLILEVARISDLTMWCQAGIQVLFDIGLGFGPVISLSSHMSDFN-NCLKDAFLMGLFKI 512

  Fly   347 LTSILAGCIIFGILGNLAFET-------NTKDISQVVKGG------------------------- 379
            :|.::.......|||..|..|       ||..:..::..|                         
  Rat   513 VTLLITTPFFLSILGFWATITTHHCCKKNTNKLLMLIAQGILPPEVEPPDLNDDPISIYNSWLNS 577

  Fly   380 -------AGLA---------------------FISYPEAIAKFKYLP--QLFAVLFFFMLLVLGI 414
                   |.|:                     |:.:.|.|:   .||  ..:.||||..||.||:
  Rat   578 LPPPLRSAVLSMVPECNIQKQFMRIEDSPRFLFLIFTEVIS---LLPGSAFWTVLFFLALLGLGL 639

  Fly   415 GSNIGMASAVVNVVKDRF---THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIA 476
            .:|:......:..::|.|   ...|. ||.|..|:..|||||:::.|.|.:..:|:..|......
  Rat   640 CTNLMYMLGNILTLQDTFPFCRRQPR-LLTVGVSMTTFLCGLIFIQPSGIYYFSLLSEYWVAVPI 703

  Fly   477 LVLAIAELLAVGWIYGVKRICSDIEFMLN----VKTSFYWRICWAIVAPGLMFLVLVYMLFSYEP 537
            :.:.:.|.|||.|.||.||..:|:..:|:    ...|:.||....:|..||:..:.:|::     
  Rat   704 ITIILCETLAVAWAYGAKRFLADMMALLSRPIFPGCSWLWRYVSPVVLLGLLLFICIYLV----- 763

  Fly   538 LTYRGVQYPPVYYMAGWIIWGLG-----VLQLPFWALVTI 572
               :|    |:.|||    |...     |...|.|:|:.|
  Rat   764 ---QG----PLVYMA----WDSSTSKEVVRYFPMWSLMLI 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 134/549 (24%)
Slc6a16XP_038949993.1 SLC6sbd_NTT5 232..802 CDD:271392 145/593 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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