DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a3

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_036826.1 Gene:Slc6a3 / 24898 RGDID:3715 Length:619 Species:Rattus norvegicus


Alignment Length:569 Identity:195/569 - (34%)
Similarity:305/569 - (53%) Gaps:17/569 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VIYSAEGEELT----INCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGA 94
            ::....|.:||    ||.......:.:|:.||:.::||.|.|..:|.|.||||||::..:|||||
  Rat    33 LVKEQNGVQLTNSTLINPPQTPVEAQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGA 97

  Fly    95 FLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMAL 159
            ||:||::.:::.|.|::|:|:.:|||:..|....:.:.|:::|:.:..:..:.....:|..|:|.
  Rat    98 FLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAW 162

  Fly   160 TIRYLVASFSEVLPWTYCLVEWGK-SCVATGATAANDS-----SIVQGVSSAELFFTQTVLREPE 218
            .:.|..:||:..|||.:|...|.. :|  :.|.|:|.|     :...|.:.|..:|.:.||...:
  Rat   163 ALHYFFSSFTMDLPWIHCNNTWNSPNC--SDAHASNSSDGLGLNDTFGTTPAAEYFERGVLHLHQ 225

  Fly   219 SLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAW 283
            |...:.||.|.|.|..||:...|::...|.||:::|||..:..|..|||::..||:|.||||||.
  Rat   226 SRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAM 290

  Fly   284 QGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLT 348
            .||..:|...:.:|....||..|.||:.|||.:.||.|:.::|:|.|..|.::|.||.|:|:|||
  Rat   291 DGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLT 355

  Fly   349 SILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLG 413
            |..:|.::|..||.:|.:.|. .|..|...|.||.||.||||||... |...:|.:||.|||.||
  Rat   356 SFSSGFVVFSFLGYMAQKHNV-PIRDVATDGPGLIFIIYPEAIATLP-LSSAWAAVFFLMLLTLG 418

  Fly   414 IGSNIGMASAVVNVVKDRF--THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIA 476
            |.|.:|...:|:..:.|.|  .|....|..:...:..||..|..:|.||.:|..|:|.:......
  Rat   419 IDSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSI 483

  Fly   477 LVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYR 541
            |...:.|.:.|.|.|||::...||:.|...:.:.|||:||.:|:|..:..|:|..:.::.|..|.
  Rat   484 LFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPHYG 548

  Fly   542 GVQYPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQP 590
            ...:|......||||....:..:|.:|.......|| :|..|...|:.|
  Rat   549 AYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPG-SFREKLAYAITP 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 174/481 (36%)
Slc6a3NP_036826.1 SLC6sbd_DAT1 60..613 CDD:212083 190/542 (35%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 9/29 (31%)

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