DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a18

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus


Alignment Length:645 Identity:192/645 - (29%)
Similarity:307/645 - (47%) Gaps:131/645 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIV 102
            |.|.:..::.|.|      |.:|...:::|.|||..:|||||:||||::...:|||||||||.|.
Mouse     4 ASGMDPLVDIEDE------RPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIA 62

  Fly   103 LLLIGRPVYYLEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVA 166
            |:..|.|::|:|:.|||...||.|..: .::|.:.|:..|....:.|.:.||..::...:.:.:.
Mouse    63 LVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLN 127

  Fly   167 SFSEVLPWTYCLVEWGKS-----CVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLG 226
            ||...|||:.|.::..::     |.::|..             :..::.||:   ..:.|.:..|
Mouse   128 SFQHPLPWSTCPLDLNRTGFVQECQSSGTV-------------SYFWYRQTL---NITSDISNTG 176

  Fly   227 TPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLK 291
            |..|.|.|||:|.|..:...:.:||.|:||..||.|||||:::.:.|||.:|||||.:|::|...
Mouse   177 TIQWKLFLCLVACWSTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLIYLFT 241

  Fly   292 PQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCII 356
            |....|.||.||..|.||:||||::.||..:.:||:|....|..||.:||..::|:||:.|...|
Mouse   242 PNMKTLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASIAI 306

  Fly   357 FGILGNLA------------------FE--------------------TNTKDISQV-------- 375
            |.::|..|                  |:                    |.|..::|:        
Mouse   307 FSVMGFKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKTCHLE 371

  Fly   376 -----VKGGAGLAFISYPEAIAKFKYLP--QLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFT 433
                 ...|.|||||.:.||:.   ::|  .:::||||.||..||:.|..|....|:..:.| ..
Mouse   372 DFLDKSASGPGLAFIVFTEAVL---HMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLLD-MG 432

  Fly   434 HLPHWL-LAVSASIIGFLC---GLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVK 494
            .||..: ..|...:|.|.|   .:.:....|.:.|.:.|.:..:...::.|..|::.|..|||:|
Mouse   433 ILPKGIPKEVMTGVICFACFLSAICFTLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGMK 497

  Fly   495 RICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVY---------- 549
            |.|.|||:|...:...||::.|.:|:|.|:|.:.:    ||..|.   :|.||.|          
Mouse   498 RFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFL----SYIVLL---IQTPPSYKAWNPQYEHF 555

  Fly   550 ------YMAGWI------------IW--GLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQ 589
                  :..||:            :|  |:.:.|     |::.|:|..|....:.||.:|
Mouse   556 PSREEKFYPGWVQVTCVLLSFLPSLWVPGVALAQ-----LLSQYKQRWKATHLESGLKLQ 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 168/536 (31%)
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 182/612 (30%)

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