DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a2

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_033235.3 Gene:Slc6a2 / 20538 MGIID:1270850 Length:617 Species:Mus musculus


Alignment Length:536 Identity:199/536 - (37%)
Similarity:297/536 - (55%) Gaps:16/536 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AESESSGQ-RDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYY 112
            |..:|..| |:.|.:.::||.|.:..:|.|.||||||::..:||||||||||.:.|::.|.|::|
Mouse    47 ASQDSDAQPRETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFY 111

  Fly   113 LEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYC 177
            :|:.:||::..|....:.:.|..:|:.|..:........||..|:|.::.||.|||:..||||.|
Mouse   112 MELALGQYNREGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNC 176

  Fly   178 LVEWGK-SCV---ATGATAANDS---SIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLC 235
            ...|.. :|.   ...|:...|.   |..:...:|| |:.:.||...||...:.:|.|.|.|:||
Mouse   177 GHSWNSPNCTDPKLLNASVLGDHTKYSKYKFTPAAE-FYERGVLHLHESSGIHDIGLPQWQLLLC 240

  Fly   236 LLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNP 300
            |:...|::...|.||:::|||..:..|..||.::.|||:..||||||..||..:|...:.:|...
Mouse   241 LMVVIVVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEA 305

  Fly   301 HVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAF 365
            .||..|.||:||||...||.|:.:||:|.|:.|.::|.::.:||:.:||.::|..||.|||.:|.
Mouse   306 TVWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFISGFAIFSILGYMAH 370

  Fly   366 ETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKD 430
            | :..:|..|...||||.||.|||||:.... ...:|||||.|||.||:.|::|...||:..:.|
Mouse   371 E-HKVNIEDVATEGAGLVFILYPEAISTLSG-STFWAVLFFLMLLALGLDSSMGGMEAVITGLAD 433

  Fly   431 RFTHLPHW--LLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGV 493
            .|..|...  |.....:|..||..|..:|.||.:||.|:|.:......|...:.|.:.|.|.|||
Mouse   434 DFQVLKRHRKLFTCVVTISTFLLALFCITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGV 498

  Fly   494 KRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWG 558
            .|..:||:.|:..|...|||:||..|:|..:..|:|..:.:::||||....|||   .|.|:.||
Mouse   499 DRFSNDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYTYPP---WANWVGWG 560

  Fly   559 LGVLQLPFWALVTIYQ 574
            :.:..:.......||:
Mouse   561 IALSSMILVPAYVIYK 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 182/482 (38%)
Slc6a2NP_033235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
SLC5-6-like_sbd 56..615 CDD:382020 196/527 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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