DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and snf-10

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:721 Identity:150/721 - (20%)
Similarity:275/721 - (38%) Gaps:173/721 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDDAEYQKLRRNMQGAQGSREGHPGSNDGISTVIYSAEGEEL-----TINCEAES--------- 51
            |...:::::|::....::.:...  .||:.::....|...||:     |.|..|.|         
 Worm     1 MASSSDFKQLKQTRTKSEETTRS--ASNETVNDDNRSTTTEEIIPIKKTSNATAISNIGFKSVTN 63

  Fly    52 ---ESSG-----QRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENG--GGAFLIPYVIVLLLI 106
               |:.|     :...|:...|.:.:.::.....||:|.||::.   |  ||.|...:....:.|
 Worm    64 LALENIGLDTKMEGPTWTSKWEAITATLSFVTCSGNIWFFPYLC---GYYGGWFPYQFTFCYVFI 125

  Fly   107 GRPVYYLEVIIGQFSSRGCIRAFD-MAPIMRGIAYGQVYSTALATTYYA--CIMALTI-RYLVAS 167
            ..|:.|||..:||::|...:..|. |||.|.|::.|..:.....|...:  .|..||| .:...|
 Worm   126 AVPLLYLETALGQYASASPLSVFSRMAPAMAGLSAGMCFIMVFRTISLSVWAIYDLTIFTHASQS 190

  Fly   168 FSEVLPWTYC--------LVEWGKSCVATGATAANDSS---------IVQGVSSAELFFTQTV-- 213
            .....||..|        .|.:..|...|.....:|..         ..:|....:..|...|  
 Worm   191 IWSTSPWESCQESQSGDYCVNYKLSSKCTWIQPGSDKECDEYQEMLIATRGFQQRKSPFMSFVHG 255

  Fly   214 LREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVT 278
            |....|:..|....||...::|.:..|:|||.|...|.:..|:..........|..|:||...::
 Worm   256 LMYKRSITMNDWEPPSVTSIICAVCLWIIIGIISIGGSKVLGRTGIVALTLLLVGTIMLLSYGMS 320

  Fly   279 LPGAWQGIVYFL------KPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKD 337
            |.........|.      :.:|..:.:   |..|......:|.:..|.:..:||.|:|:..:|:|
 Worm   321 LNDTTNVFTAFFYQSEGYEDKWMWVWS---WADAAAHALRALNVGCGGIQKFASLNNFHNKIHRD 382

  Fly   338 VIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFA 402
            |::|:.:..:..|..|.:.|..:                   |.:..:.||:..|..:.  ||:|
 Worm   383 VLLISIVSFVFYICTGLLSFMFM-------------------AEIGRLYYPDLEASERI--QLYA 426

  Fly   403 ----------------------VLFFFMLL----VLGIGSNIGMASAVV----NVVKDRF-THLP 436
                                  |..|::.|    :.||.|.|.:.|:::    |..:.:: ..|.
 Worm   427 TPVMIESVISEILTNSSMGSIWVFLFWLTLAACSIQGISSYIWVISSMIVERLNGSRRKYGKALA 491

  Fly   437 HW-----LLAVSASIIGFLCGLVYMTPGGQFVLNLVD---FYGCTFIALVLAIAELLAVGWIYGV 493
            .|     :||: .|:.|.:..|.::..||..:::.::   .||..|||.|    |::.|.::||.
 Worm   492 SWHKRAIILAI-MSVTGLISSLPFLGNGGINLMSSIETFASYGTIFIAFV----EVITVSYVYGF 551

  Fly   494 KRICSDIEFML------NVKTSFYWRICWAIVAPGLMFLVLVYMLFSY---EPLTYRGVQYPPVY 549
            ||...:|..|:      ||    :|.:.|.:::|.|:.:....::.::   :......:...|: 
 Worm   552 KRFSVNIRAMIGGHGPPNV----FWWLNWLVISPILLIVTFGCIVATFGQKKAFNENSIVSDPI- 611

  Fly   550 YMAGWIIWGLGVLQLPFWALVTIY-----------QQPGKTFGSKFGLAMQPTANWGPLQTQ--- 600
                    |..:|.:| ...|.:|           .:|       |.:.::.|.:|||:..:   
 Worm   612 --------GYSLLVMP-CIFVILYFLRDEYDRRKNMEP-------FVVMIRATGDWGPMNPEDRR 660

  Fly   601 ---KFE 603
               |||
 Worm   661 NAVKFE 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 122/549 (22%)
snf-10NP_505682.2 SNF 78..628 CDD:264495 128/595 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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