DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and F56F4.3

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_491770.3 Gene:F56F4.3 / 186398 WormBaseID:WBGene00018980 Length:701 Species:Caenorhabditis elegans


Alignment Length:726 Identity:159/726 - (21%)
Similarity:254/726 - (34%) Gaps:206/726 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDDAEY--------QKLRRNMQGAQGSREGHPG----SNDGISTVIYSAEGEELTIN------- 46
            :.::.||        :|.::.|...:.|.|...|    .||           |||.|:       
 Worm    31 LQEEIEYNIVYGYDRKKKKKRMDSTESSSENPDGIEKFDND-----------EELAISPTGNPNL 84

  Fly    47 ----CEAE--SESSGQRD----QWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVI 101
                .|||  .:..|.|:    ...|.:..|.||:.|   |.|...|......:||..|.:||.|
 Worm    85 NPSKIEAEELEQEIGSRNISRPSTYRQLSLLLSCVTL---LKNNMVFIECFFNHGGVYFFVPYFI 146

  Fly   102 VLLLIGRPVYYLEVIIGQFSSRGCIRAFD-MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLV 165
            :|.::|.|:...|:.:.||||......|. |||::.||.: .:....:..|.|.......:.|..
 Worm   147 ILFVLGVPMAIFELSLAQFSSIPMNGMFTRMAPMLGGIPW-LILCLRIIYTVYIAFDPRFLLYAY 210

  Fly   166 ASFSEVLP----WTYCLVEWGKSCV-ATGATAAND----SSIVQGVSSAEL-------FFTQTVL 214
            .||..|:.    |.:|....|..|. .|.:...|:    ...|:.|...:|       ..|...|
 Worm   211 KSFVTVITGNMNWIHCDDYKGVRCFDPTWSCKINEFRLNGECVKDVHIRKLAQQQDYGLLTYFGL 275

  Fly   215 RE-------PESL--DDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMI 270
            ||       |..:  :.|||..  .|.:|..|...:|.|.|..||.|.....:.|....|.:.||
 Worm   276 REYRLISIIPSQIYKEINGLDI--MDNILAALVFLLIAGFITYKGHRFFASLAGFFVFLPILGMI 338

  Fly   271 VLLIRAVTLPGAWQGIVYF-----LKPQWSQLLNPH---------VWYAAITQMFFSLAICFGTL 321
            ..:|           :||:     .|..::|:|..:         .|..|......::.|..|||
 Worm   339 PAVI-----------LVYYDVGSRKKHFFNQILKNNDITKIFELSAWLNAARVTVKTVYIADGTL 392

  Fly   322 VMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGIL--------------------GNL--- 363
            :...|..||..|..||.:::....:...:|   :.||||                    |:|   
 Worm   393 MALGSRADFRHNFIKDAVLLAASGATYRLL---LCFGILPILYVANDILYPFAKTVYARGDLVQF 454

  Fly   364 -AFE----------------TNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLV 411
             |.|                |.|..:..::.|....||::|  .:..|:.|......||..:|.:
 Worm   455 HAIELFFSALPSYAIPGISPTVTFFVYAMLYGTINFAFVAY--QVITFEMLINALHHLFPRLLYL 517

  Fly   412 LGIGSNIGMASAVVNVVKDRF-THLPHWLLAV----SASIIGFLCGLVYMTPGGQFVLNLVDFYG 471
            ......|.:..|.|.::...: ..||:..|||    ..:|..::.|||..|              
 Worm   518 KQKSVRICIIMATVTLLLFLYILSLPYKQLAVGYQKELAIDDYVVGLVSTT-------------- 568

  Fly   472 CTFIALVLAIAELLAVGWIYGVKRICSD---------IEFMLNVKTSFYWRICWAIVAPGLMFLV 527
             .||       :|::|..:||.||:..:         :.:.|..|...:..:.||...| :..||
 Worm   569 -VFI-------QLISVSIVYGYKRLLINFLTMLKHHPVTYKLVEKCRVFLYVMWAFFLP-ISCLV 624

  Fly   528 LV-------YMLFSYEPLTYRGVQYPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGKTFGSKFG 585
            .:       |.::.:..:.|..:...|:.|:|               ..:|:|     ....:|.
 Worm   625 SICSIIVKKYQIYHWPLVLYAAISALPLIYLA---------------RKLTMY-----IMRKEFV 669

  Fly   586 LAMQPTANWGP 596
            ..:..|..|.|
 Worm   670 SGLSQTHRWQP 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 131/578 (23%)
F56F4.3NP_491770.3 SLC5-6-like_sbd 73..620 CDD:382020 136/591 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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