DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and mod-5

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_491095.3 Gene:mod-5 / 171879 WormBaseID:WBGene00003387 Length:671 Species:Caenorhabditis elegans


Alignment Length:563 Identity:191/563 - (33%)
Similarity:301/563 - (53%) Gaps:28/563 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVII 117
            ||..||:|:..:|||.:.:..:|.|||:||||.:..::|||||||||.|:|::.|.|::|:|:::
 Worm    96 SSMVRDKWATKMEFLLAVVGYAVDLGNIWRFPSVCYKHGGGAFLIPYFIMLMIGGLPMFYMELVL 160

  Fly   118 GQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEV----LPWTYC 177
            |||...||:..: .:.|:.|||.||..........:|..|:|..:.:.:.|.|::    :||..|
 Worm   161 GQFHRSGCVSIWRKVCPLFRGIGYGICCICTFIAIFYNAIIAQAVYFAIVSLSKIWDSEVPWASC 225

  Fly   178 LVEWGKSCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVI 242
            ...|.....:.........:.....:.:|.::...||...:|...:.||.....:.:||||.:::
 Worm   226 GNPWNTPRCSDDLNVTISRNGTPLTTPSEEYYLYKVLEVQKSTGFDDLGGVKTSMAVCLLAVFIM 290

  Fly   243 IGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAI 307
            :...|.||.:||||..:..|..||:|:.:||||.:.||||..|:.|::.|.:.:|.:|.||.||.
 Worm   291 VYFALWKGPQSSGKIVWVTATAPYIILSILLIRGLLLPGAKNGLYYYVTPDFEKLKDPAVWSAAA 355

  Fly   308 TQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDI 372
            ||:||||...||.|:..:|:||||.|.::|.:..:.|:..||..:||::|..||.::..|| |.|
 Worm   356 TQIFFSLGPGFGVLLALSSYNDFNNNCYRDAVTTSIINCATSFFSGCVVFSTLGYMSLLTN-KPI 419

  Fly   373 SQVV-KGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFTHLP 436
            ::|| :..|.|.||.||:|:|...| ...::.:||.||:.|||.|......|.:....|....|.
 Worm   420 NEVVGEHDASLIFIVYPQALATMDY-SCFWSFIFFVMLITLGIDSTFAGIEAFITGFCDESRFLS 483

  Fly   437 ---HWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICS 498
               .|.:.|...|..|| ....::.|||||:..:|.||.:...|.:...|::||.|.|||.:...
 Worm   484 KNRKWFVLVICIIYYFL-SFPAISYGGQFVIPFLDEYGVSLSVLFIVTCEMIAVCWFYGVDQFSK 547

  Fly   499 DIEFMLNVKTSFYWRICWAI--VAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLGV 561
            ||..||......|||:||..  |...::|::.||. .|::|:......:|....:.||.:..|.|
 Worm   548 DIRAMLGFYPGIYWRVCWTCSPVFISVIFIMTVYN-SSFKPIQMASYTFPWWSVILGWFLRLLSV 611

  Fly   562 LQLPFWALV-------TIYQQ------PGKTFGSKFGLAMQPT 591
            |.:|.:|::       |:|::      |.:...|...||..||
 Worm   612 LAIPVFAIIYLLSGTGTLYERFRWAITPQQRRNSATSLAADPT 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 170/484 (35%)
mod-5NP_491095.3 SLC6sbd_SERT-like 100..639 CDD:271388 183/542 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2944
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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