DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a5

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_976079.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:799 Species:Rattus norvegicus


Alignment Length:661 Identity:227/661 - (34%)
Similarity:352/661 - (53%) Gaps:68/661 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NMQGAQGSREGHPGS------NDGISTVIYSAEG---------EELTINCEAESESSGQRDQWSR 62
            |:..|:|:.| |..:      |...|||:...:|         ...||..:.:.:.:..|..||.
  Rat   135 NVSVAKGTLE-HNNTPPVGWVNMSQSTVVLGTDGIASVLPGSVATTTIPEDEQGDENKARGNWSS 198

  Fly    63 GVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIR 127
            .::|:.|.:..:||||||||||::|.:||||||||||:::|.|.|.|:::|||.:|||:|:|.:.
  Rat   199 KLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVS 263

  Fly   128 AFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG---------- 182
            .:...|.::|.....:..:.|...||..|:..|:.||.|||..||||..|...|.          
  Rat   264 VWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYLFASFVSVLPWGSCNNPWNTPECKDKTKL 328

  Fly   183 --KSCVA------------------TGATAANDSSIVQG--VSSAELFFTQTVLREPESLDDNGL 225
              .|||.                  ...|..|.:|....  ||.:|.:|...||:....::..  
  Rat   329 LLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVNFTSQANKTFVSGSEEYFKYFVLKISAGIEYP-- 391

  Fly   226 GTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFL 290
            |...|.|..||...|||:...|:|||::|||..||.|.||||::::||||.||||||..||.||:
  Rat   392 GEIRWPLPFCLFLAWVIVYASLAKGIKTSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFI 456

  Fly   291 KPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCI 355
            .|:|.:|.:..||..|.||:||||:..:|.|:..:|:|.|:.|.::|.:|:|..:|.|||.||.:
  Rat   457 TPKWEKLTDATVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFV 521

  Fly   356 IFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGM 420
            ||.::|.:|.|... :|..|...|.|:||:.||||:.:....| .:|::||.|||.||:.:....
  Rat   522 IFSVIGFMANERKV-NIENVADQGPGIAFVVYPEALTRLPLSP-FWAIIFFLMLLTLGLDTMFAT 584

  Fly   421 ASAVVNVVKDRF-----THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLA 480
            ...:|..:.|.|     ||.|  :..:...|..|:.|...:|.||.::..|||.|..::..:::|
  Rat   585 IETIVTSISDEFPKYLRTHKP--VFTLGCCICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIA 647

  Fly   481 IAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQY 545
            |.||:.:.::||::|.|.|||.|:..:.:.:|::|||.|.|.::..:|.:..:.:||:||...:|
  Rat   648 IFELVGISYVYGLQRFCEDIEMMIGFQPNIFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRY 712

  Fly   546 PPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQPTANWGPLQTQKFEAYIIHR- 609
            |....:.||::....|:.:|...::.:|..||: |..:..|...|..:|||...|       || 
  Rat   713 PNWSMVLGWLMLACSVIWIPIMFVIKMYLAPGR-FIERLKLVCSPQPDWGPFLAQ-------HRG 769

  Fly   610 KREADFKSPRG 620
            :|..:...|.|
  Rat   770 ERYKNMIDPLG 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 189/510 (37%)
Slc6a5NP_976079.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
SLC6sbd_GlyT2 193..789 CDD:271389 215/602 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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