DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a5

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_063131123.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:812 Species:Rattus norvegicus


Alignment Length:630 Identity:221/630 - (35%)
Similarity:344/630 - (54%) Gaps:53/630 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DGISTVIYSAEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGG 93
            |||::|:..:.. ..||..:.:.:.:..|..||..::|:.|.:..:||||||||||::|.:||||
  Rat   179 DGIASVLPGSVA-TTTIPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGG 242

  Fly    94 AFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMA 158
            ||||||:::|.|.|.|:::|||.:|||:|:|.:..:...|.::|.....:..:.|...||..|:.
  Rat   243 AFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIIC 307

  Fly   159 LTIRYLVASFSEVLPWTYCLVEWG------------KSCVA------------------TGATAA 193
            .|:.||.|||..||||..|...|.            .|||.                  ...|..
  Rat   308 YTLFYLFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMV 372

  Fly   194 NDSSIVQG--VSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGK 256
            |.:|....  ||.:|.:|...||:....::..  |...|.|..||...|||:...|:|||::|||
  Rat   373 NFTSQANKTFVSGSEEYFKYFVLKISAGIEYP--GEIRWPLAFCLFLAWVIVYASLAKGIKTSGK 435

  Fly   257 ASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTL 321
            ..||.|.||||::::||||.||||||..||.||:.|:|.:|.:..||..|.||:||||:..:|.|
  Rat   436 VVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAAWGGL 500

  Fly   322 VMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFIS 386
            :..:|:|.|:.|.::|.:|:|..:|.|||.||.:||.::|.:|.|... :|..|...|.|:||:.
  Rat   501 ITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERKV-NIENVADQGPGIAFVV 564

  Fly   387 YPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRF-----THLPHWLLAVSASI 446
            ||||:.:....| .:|::||.|||.||:.:.......:|..:.|.|     ||.|  :..:...|
  Rat   565 YPEALTRLPLSP-FWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKP--VFTLGCCI 626

  Fly   447 IGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFY 511
            ..|:.|...:|.||.::..|||.|..::..:::||.||:.:.::||::|.|.|||.|:..:.:.:
  Rat   627 CFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIF 691

  Fly   512 WRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLGVLQLPFWALVTIYQQP 576
            |::|||.|.|.::..:|.:..:.:||:||...:||....:.||::....|:.:|...::.:|..|
  Rat   692 WKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLMLACSVIWIPIMFVIKMYLAP 756

  Fly   577 GKTFGSKFGLAMQPTANWGPLQTQKFEAYIIHR-KREADFKSPRG 620
            |: |..:..|...|..:|||...|       || :|..:...|.|
  Rat   757 GR-FIERLKLVCSPQPDWGPFLAQ-------HRGERYKNMIDPLG 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 189/510 (37%)
Slc6a5XP_063131123.1 None

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