DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and Slc6a20a

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_631881.1 Gene:Slc6a20a / 102680 MGIID:2143217 Length:592 Species:Mus musculus


Alignment Length:573 Identity:184/573 - (32%)
Similarity:293/573 - (51%) Gaps:100/573 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFS 121
            |.||...::|:|:||:.:||||||||||::....|||:||:||:|:|::.|.|:.|||:.:||..
Mouse     5 RPQWGHPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVGQRM 69

  Fly   122 SRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVE----- 180
            .:|.|.|: .::|.:.|:....|..:...:.||..|.|....||..||.:.|||:.|.:.     
Mouse    70 RQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPWSVCPLNSNHTG 134

  Fly   181 WGKSCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGT 245
            :.:.|              :..||.:.|:.:..|....|:.:|| |. .|:..|||...|:::..
Mouse   135 YDEEC--------------EKASSTQYFWYRKTLNISPSIQENG-GV-QWEPALCLTLAWLMVYL 183

  Fly   246 ILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQM 310
            .:.:|..|:||..||.|..||.::|:.|:|.:||.||..|::|...|:..||.||..|..|.||:
Mouse   184 CILRGTESTGKVVYFTASMPYCVLIIYLVRGLTLHGATNGLMYMFTPKMEQLANPKAWINAATQI 248

  Fly   311 FFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLA---FE------ 366
            ||||.:.||:|:.:||:|:.:.|..|..||::.|:|.|||.|..:.|.|.|..|   :|      
Mouse   249 FFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSIINSSTSIFASIVTFSIYGFKATFNYENCLNKV 313

  Fly   367 ----TNTKDIS---------QVVKG-------------------------------GAGLAFISY 387
                ||:.|:.         :.||.                               |.|||||.|
Mouse   314 ILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFPHIRNCSLESELDTAVQGTGLAFIVY 378

  Fly   388 PEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDR---FTHLPHWLLAVSASIIGF 449
            .|||...: :.||::||:|||||:|||||.:|..:|::..:.|.   .::||...::....:|..
Mouse   379 TEAIKNME-VSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTDSKVISSYLPKEAISGLVCLINC 442

  Fly   450 LCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRI 514
            ..|:|:....|.:..::.:.|..|...|::.:.|.:||.::||:||..||:..|.....|:||::
Mouse   443 AVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLKRFESDLRAMTGRTLSWYWKV 507

  Fly   515 CWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLGVLQLPFW 567
            .||.|:|     :|:..||              ::|::.:|:  .|.||...|
Mouse   508 MWAFVSP-----LLIVGLF--------------IFYLSDYIL--TGTLQYQAW 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 175/535 (33%)
Slc6a20aNP_631881.1 SLC5-6-like_sbd 2..577 CDD:294310 184/573 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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