DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a16

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_004916326.1 Gene:slc6a16 / 100497867 XenbaseID:XB-GENE-996340 Length:677 Species:Xenopus tropicalis


Alignment Length:683 Identity:190/683 - (27%)
Similarity:301/683 - (44%) Gaps:155/683 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SAEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVI 101
            |..||.......|||.:   |..|...|:::.:.:..|||||||||||::..:||||:||:.|.:
 Frog    11 STAGESQLGLLPAESVA---RPTWGSKVQYILAQVGFSVGLGNVWRFPYLCHQNGGGSFLLLYFL 72

  Fly   102 VLLLIGRPVYYLEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLV 165
            :||:||.|:::||:..||...:|.|..: .::|.:.||.:...........||..|:..::.||.
 Frog    73 LLLIIGIPLFFLELAAGQSIRQGSIGVWKHISPRLAGIGFASCVVCGFVALYYNVIIGWSLFYLF 137

  Fly   166 ASFSEVLPWTYC---------LVEWGKSCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLD 221
            .||...|||..|         :.|..||                  |:...|:.::.|....:::
 Frog   138 NSFHYPLPWENCPTLPNMTQEVTECAKS------------------SNTTYFWYRSALNVTNTIE 184

  Fly   222 DNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGI 286
            .:.:   :|.:..||...|.::...:.|||:||||..||.::||||::...|||.:.|.||..||
 Frog   185 SSEM---NWPMTGCLCLAWFLVCGGMIKGIKSSGKVMYFSSVFPYVVLFCFLIRGLLLEGAADGI 246

  Fly   287 VYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSIL 351
            .....|:.....|..||..|.||:||:|.:.||:::.|:|:||...|.|.|.|:::.|:.:||||
 Frog   247 RIMFTPKLEIWGNIQVWRQAATQVFFALGLGFGSVIAYSSYNDRQNNCHFDAILVSFINFMTSIL 311

  Fly   352 AGCIIFGILGNLA-------FETNTKDISQVVKGGA----------------------------- 380
            |..::|.:||..|       .:||.:.|..::..|:                             
 Frog   312 ATLVVFAVLGFRANDLTRHCIDTNREKILYLISNGSLYENIVPMKNLTNSEYSQWYEITNNTLNL 376

  Fly   381 ---------------------GLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAV 424
                                 |||||::.||:.:|...| .:::|||.|||.||:.:..|....:
 Frog   377 QQYGISDCRVEDVMNEGVEGTGLAFIAFTEAMTRFPASP-FWSILFFLMLLNLGLSTMFGNMQGI 440

  Fly   425 VNVVKDRFTHL--PHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAV 487
            :..:.|.|.:|  ...:..|...|.|.|.||:::...|.:.:::.|.|..|...:::.|.|.:||
 Frog   441 ITPLLDNFPYLRKKKTIFTVICCITGLLIGLIFVQRSGSYFVSMFDDYSATLPLIIVVIFENIAV 505

  Fly   488 GWIYGVKRICSDIEFMLNVKTSFYWRI---CWAIVA----PGLMFLVLVYMLFSY--------EP 537
            .|:||.:|...||..||..:.   |||   .|..::    .||:...|:.|...|        |.
 Frog   506 AWVYGAERFMDDIGGMLGHRP---WRIYKYIWQYISILGMIGLLLASLIRMCIEYPRYQAWNQEQ 567

  Fly   538 LTYRGVQYPPVYYMAGWIIWGLGVL-------QLPF---------------WALVTI----YQQP 576
            .....::|||         |.||:|       .||.               |...|.    |.| 
 Frog   568 AKKEMLEYPP---------WALGMLTSLIIVAALPIPIVFLKHIIQDWILKWKTKTYGDCDYTQ- 622

  Fly   577 GKTFGSKFGLAMQPTANWG-------PLQTQKF 602
            |.|.....|..::..|:.|       |::.:.|
 Frog   623 GNTVDDMIGPIVESPADLGYVGNGYLPVEMEDF 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 160/549 (29%)
slc6a16XP_004916326.1 SLC5-6-like_sbd 28..599 CDD:444915 173/604 (29%)

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