DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a4l

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_012825214.2 Gene:slc6a4l / 100496361 XenbaseID:XB-GENE-981144 Length:590 Species:Xenopus tropicalis


Alignment Length:562 Identity:203/562 - (36%)
Similarity:316/562 - (56%) Gaps:31/562 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIG 107
            |.:..:|:|     ||:||:.::||.|.|..:|.||||||||:|..:||||||||||.|:.:..|
 Frog    28 LPLITQADS-----RDKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGG 87

  Fly   108 RPVYYLEVIIGQFSSRGCIRAFD-MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEV 171
            .|::|:|:.:|||...|.|..:. :.||.:||.:.........:.||..|:|..:.|..:||:|.
 Frog    88 VPLFYMELALGQFHRMGAIPIWKRICPIFKGIGFAICIIALYVSFYYNTIIAWALFYFYSSFTET 152

  Fly   172 LPWTYCLVEWG-KSCV----ATGATAANDSSIVQGVSSAELFFTQTVL--REPESLDDNGLGTPS 229
            ||||.|...|. .:|.    .:..|..|.|.     |.||.|:|:.||  .|.|.||:  :|...
 Frog   153 LPWTNCDNPWNTPNCTNYFGRSNITWNNYSK-----SPAEEFYTRKVLGIHEAEGLDN--VGGLR 210

  Fly   230 WDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQW 294
            |.|:|||...:.|:...|.||:::|||..:..|..|||::::||||..||||||:||:::|:|:|
 Frog   211 WQLILCLFIIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLLILLIRGATLPGAWRGILFYLRPKW 275

  Fly   295 SQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGI 359
            .:|::..||..|..|:||||...||.|:..:|:|.|:.|.::|.:|.:|::.|||.::|.:||.:
 Frog   276 EKLMDTAVWVDAAAQIFFSLGPGFGVLLALSSYNPFHNNCYRDALITSTVNCLTSFVSGFVIFTV 340

  Fly   360 LGNLAFETNTKDISQVVKG-GAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASA 423
            ||.:| |....::..|.|. |..|.||:||||||.. .....||::||.|::.||:.|..|...|
 Frog   341 LGYMA-EMRGVEVEDVAKDKGPSLLFITYPEAIANM-VGSTFFAIIFFLMMITLGLDSTFGGLEA 403

  Fly   424 VVNVVKDRFTHL---PHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFY--GCTFIALVLAIAE 483
            ::..|.|.:.|:   ...|..:...|:.|...|..:|.||.:|:.|::.:  ||..||:|  ..|
 Frog   404 IITAVMDEYPHILSKRRELFVLGLVIVCFTGSLSTLTYGGAYVVKLLEQFGAGCPIIAVV--FLE 466

  Fly   484 LLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPV 548
            .:||.|.||::|..:|::.||......:|||||..::|..:..::|..|....||.....|||..
 Frog   467 AIAVSWFYGIQRFSNDVKSMLGFVPGIFWRICWVAISPAFLAFIIVSSLMDQPPLILFDYQYPKW 531

  Fly   549 YYMAGWIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQP 590
            ....|::|.....:.:|.:.:..:...|| :...:..:.::|
 Frog   532 TVSVGFLIGASSFIWIPVYMVYKLVWTPG-SLKERLAVCVRP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 187/487 (38%)
slc6a4lXP_012825214.2 SLC5-6-like_sbd 37..573 CDD:382020 200/548 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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