DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and slc6a6

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:551 Identity:203/551 - (36%)
Similarity:308/551 - (55%) Gaps:34/551 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ESESSG---QRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVY 111
            |.|:.|   ||::|:..::|:.|.....:|||||||||::..:||||||||||.|.|...|.||:
 Frog    31 EDEADGKPPQREKWASKIDFVLSVAGGFIGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGGGLPVF 95

  Fly   112 YLEVIIGQFSSRGCIRAFD-MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWT 175
            :|||::|||:|.|.|..:: :.|:..||.|..:...:|...||..|:|..:.||..||...|||.
 Frog    96 FLEVVLGQFTSEGGITCWEKICPVFTGIGYASIVIVSLLNVYYIVILAWGVYYLFQSFQGQLPWA 160

  Fly   176 YCLVEWG-KSCVA-------TGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDL 232
            .|...|. :|||.       |...:.|.::....|:.   |:...||...:.:||  :|...|||
 Frog   161 LCHQPWNTESCVEDTFRKNWTMWMSMNSTNFTSPVTE---FWEHKVLSLSKGIDD--VGVLKWDL 220

  Fly   233 VLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQL 297
            .||||.||||....:.||:||:||..||.|.||:::::|||||.||||||.:||.::|.|..::|
 Frog   221 ALCLLLTWVICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRGVTLPGAAEGIKFYLYPDITRL 285

  Fly   298 LNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGN 362
            .:|.||..|.||:|||.|||.|.:....|:|.:..|.::|.:::..::|.||.::|..||.:||.
 Frog   286 ADPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSFVSGFAIFSVLGF 350

  Fly   363 LAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNV 427
            :|.|... ||:.|.:.|.|||||:||:|::... ||..:|:|||.|||:||:.|........:..
 Frog   351 MAQEQGV-DIADVAESGPGLAFIAYPKAVSMMP-LPSFWAILFFIMLLLLGLDSQFVEVEGQITS 413

  Fly   428 VKDRFTHLPHWL---------LAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALV-LAIA 482
            :.|.:   |.:|         :|| ...:.:|.||..:|.||.:|..|.|:|..:.:.|: :|..
 Frog   414 LVDLY---PSFLRKGYRREIFIAV-VCFLSYLLGLTMVTEGGMYVFQLFDYYAASGVCLLWVAFF 474

  Fly   483 ELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTY-RGVQYP 546
            |.:||.|:||..:...:||.|:..|...:.:..|.::.|.|.....::.|..|.|||| :...||
 Frog   475 ECVAVAWVYGADKFYDNIEDMIGYKPGPWMKWSWTVITPLLCVACFIFSLAKYTPLTYNKYYVYP 539

  Fly   547 PVYYMAGWIIWGLGVLQLPFWALVTIYQQPG 577
            ......||::....::.:|...:..|.:..|
 Frog   540 DWAIGLGWVLALSSMICIPLVVVFHIVRSDG 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 185/492 (38%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 199/541 (37%)

Return to query results.
Submit another query.