DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a1

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002941943.4 Gene:slc6a1 / 100491859 XenbaseID:XB-GENE-5824076 Length:622 Species:Xenopus tropicalis


Alignment Length:567 Identity:186/567 - (32%)
Similarity:301/567 - (53%) Gaps:27/567 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YSAEGEELTINC-EAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPY 99
            ::..||.|.:.. :.:.::...|..|....:||.||:..::|||||||||::..:||||||||||
 Frog    49 HALPGETLYLPFGQKKKKADDDRGTWKGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPY 113

  Fly   100 VIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYL 164
            .:.|:..|.|:::||..:|||:|.|.:..:.:||:.:|:....|..:.....||..|:|..:.||
 Frog   114 FLTLVFAGIPLFFLETALGQFTSIGGLGVWKLAPMFKGVGMAAVVLSFWLNIYYIVIIAWALYYL 178

  Fly   165 VASFSEVLPWTYCLVEWG-KSCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTP 228
            ..|||..|||..|...|. :.|.:.  .:.||:|   .::||...|.:..:.:.    ..|||.|
 Frog   179 FNSFSSTLPWQSCDNSWNTERCFSN--YSLNDTS---NLTSAVTEFWERNMHQM----TGGLGEP 234

  Fly   229 S---WDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFL 290
            .   |.|...|...|:::...:.||:..:||..||.|.:||.::::|..|.:|||||..||.:::
 Frog   235 GNIRWPLACTLALAWIMVYFSIWKGVEWTGKVVYFSATYPYFMLVILFFRGITLPGAMDGIRFYI 299

  Fly   291 KPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCI 355
            .|.:|:|.|..||..|.||:|||..:..|:|:...|:|.|:.|:::|.||:..|:|.||:.||.:
 Frog   300 TPDFSKLSNSEVWMDAATQIFFSYGLGLGSLIALGSYNAFDNNIYRDSIIVCGINSTTSMFAGFV 364

  Fly   356 IFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGM 420
            ||.|:|.::..|. |.|.::...|.||||::||:|:.:....| ::::|||.||::||:.|....
 Frog   365 IFSIVGFMSHITK-KPIQELAASGPGLAFLAYPQAVTQLPMSP-VWSILFFSMLVMLGLDSQFCT 427

  Fly   421 ASAVVNVVKDRFTHLPHWL------LAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALV- 478
            ....:..:.|.:   |..|      .......|.|:.|...:|.||.:|..|.|:|..:.:.|: 
 Frog   428 VEGFITALVDEY---PQCLRSRKKVFIAMVCFISFIIGFSNITQGGLYVFKLFDYYSASGMCLLF 489

  Fly   479 LAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGV 543
            |...|.:::.|.|||.|...|||.|:..:...:|::|||...|.:...|..:.:|...|||....
 Frog   490 LVFFETVSISWCYGVDRFYQDIEEMIGYQPCSWWKLCWAYFTPCICLGVFCFSVFEMTPLTLGRY 554

  Fly   544 QYPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQP 590
            .||......||::....::.:|.:.|..:....| |...:|....||
 Frog   555 VYPAWGQGIGWLMALSSMVFIPGYMLYLLLTTKG-TLRQRFREMTQP 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 167/484 (35%)
slc6a1XP_002941943.4 SLC5-6-like_sbd 62..611 CDD:382020 183/554 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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