DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a17

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002933031.1 Gene:slc6a17 / 100490416 XenbaseID:XB-GENE-964419 Length:725 Species:Xenopus tropicalis


Alignment Length:620 Identity:195/620 - (31%)
Similarity:307/620 - (49%) Gaps:109/620 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HPGSNDGISTVIYSAEGEELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIAL 88
            |..|...:|:  ..::.::|..:.|.|     .|..|:..::::.:.|..|||||||||||::..
 Frog    33 HKASALNVSS--QDSQPKQLEDSSELE-----DRPAWNNKLQYILAQIGYSVGLGNVWRFPYLCQ 90

  Fly    89 ENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFD-MAPIMRGIAYGQVYSTALATTY 152
            :|||||:::||:|:|::||.|:::||:.:||...||.|..:: :.|.:.||.|...........|
 Frog    91 KNGGGAYMVPYLILLIIIGIPLFFLELAVGQRIRRGSIGVWNYICPRLGGIGYASCVVCFFVGLY 155

  Fly   153 YACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATGATAANDS-SIVQG---VSSAELFFTQTV 213
            |..|:..:|.|...||...|||..|            .|..|.| ::|:.   .|||..||... 
 Frog   156 YNVIIGWSIFYFFQSFQYPLPWNEC------------PTVKNGSVNVVEAECDKSSATTFFWYR- 207

  Fly   214 LREPESLD-DNGL---GTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLI 274
                |:|| .|.:   |..:|.:.||||..|.::...:.|||:||||..||.:|||||::|..||
 Frog   208 ----EALDISNSISEGGGLNWKMTLCLLVAWTMVCMAMIKGIQSSGKVMYFSSLFPYVVLICFLI 268

  Fly   275 RAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVI 339
            |.:.|.|:..||::.|.|:..::|:|.||..|.||:||:|.:.||.::.::|:|..:.|...|..
 Frog   269 RGLFLRGSVDGILHMLTPKVEKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCQFDAA 333

  Fly   340 IITTIDSLTSILAGCIIFGILG---NLAFE-------------TNTKDIS--------------- 373
            :::.|:..||:||..::|.:||   |:..|             .||.||.               
 Frog   334 LVSFINFFTSVLATLVVFAVLGFKANVMNEKCVVQNAEKILGYINTHDIDYSLIPPHVNFSHLTT 398

  Fly   374 -------QVVK-------------------------GGAGLAFISYPEAIAKFKYLPQLFAVLFF 406
                   ||:|                         .|.|||||::.||:..|...| .::|:||
 Frog   399 EDYAKMYQVIKTVKEDHFQDLHLDACVLEDELDKAVQGTGLAFIAFTEAMTHFPASP-FWSVMFF 462

  Fly   407 FMLLVLGIGSNIGMASAVVNVVKDRFTHLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYG 471
            |||:.||:||.||..|.::..:.|.| .:...:|.||..|:.||.||:::...|.:.:|:.|.|.
 Frog   463 FMLINLGLGSMIGTMSGIITPIIDTF-KVRKEILTVSCCIVAFLLGLIFVQRSGNYFVNMFDDYS 526

  Fly   472 CTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYE 536
            .|....::.|.|.:||.|:||.|:...::..||..:...|:...|..|:|..|.::|...:... 
 Frog   527 ATLPLTIVVILENIAVAWVYGTKKFMQELTEMLGFRPYSYYFYSWKYVSPIFMAILLTASVIQL- 590

  Fly   537 PLTYRGVQYPPVYYMAGWI--IWGLGVLQLPFWAL 569
                 |:. ||.|  :.||  :.....:..|.|||
 Frog   591 -----GIS-PPGY--SAWIRELAAEQFVLYPTWAL 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 178/545 (33%)
slc6a17XP_002933031.1 SLC6sbd_NTT4 59..647 CDD:271403 189/587 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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