DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a7

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002940131.3 Gene:slc6a7 / 100487063 XenbaseID:XB-GENE-479449 Length:634 Species:Xenopus tropicalis


Alignment Length:563 Identity:217/563 - (38%)
Similarity:326/563 - (57%) Gaps:23/563 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYY 112
            |.:.|....|..||..::||.|||...||||||||||:.|..||||||||||.|:|.:.|.|:::
 Frog    28 ELDIEYPEDRGNWSGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLIPYFIMLAICGIPLFF 92

  Fly   113 LEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYC 177
            :|:.:|||||.|.:..:.::|:.:|:..|.:...||...||..|:|..:.||.||.:..|||.:|
 Frog    93 MELSLGQFSSLGPLAVWKISPLFKGVGMGMLLIVALVAIYYNMIIAYVLFYLFASLTSSLPWEHC 157

  Fly   178 LVEWGKS-CVATGATAANDSSIVQGVSS----AELFFTQTVLREPESLDDNGLGTPS---WDLVL 234
            ...|... |:......|::|:::..:|:    :|.::::.||....|   :|:|.|.   |.|.|
 Frog   158 GNWWNTDLCLDHHVIRASNSALLVNISNTVSPSEEYWSRYVLHIQGS---SGIGDPGQLRWKLCL 219

  Fly   235 CLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLN 299
            |||.:|.|:...:.||::||||..||.|.|||:|:::||||.|||.|||.||.::|.||:..||.
 Frog   220 CLLLSWTIVYLCILKGVKSSGKVVYFTATFPYIILVMLLIRGVTLEGAWIGIKFYLTPQFEHLLT 284

  Fly   300 PHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLA 364
            ..||..|..|:|:||.:.||.|:.:||:|.|::|:::|..|:|..::.||||||..||.:||.::
 Frog   285 SKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAFTSILAGFAIFSVLGYMS 349

  Fly   365 FETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVK 429
            .|... .:.||.|.|.||||:.||:|:......| .::.|||||||.||:.|.......:|..:.
 Frog   350 QELGV-PVDQVAKAGPGLAFVVYPQAMTMLPLSP-FWSFLFFFMLLTLGLDSQFAFMETIVTAIT 412

  Fly   430 DRFTHLPHWL---LAVSASIIG---FLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVG 488
            |.|   |::|   .||.::||.   ||.||:..|.||.:.|.|:|.|...|..||:.|...|:|.
 Frog   413 DEF---PYYLRPKKAVFSAIICVALFLLGLILATDGGMYWLVLLDDYSAGFGLLVIVITFCLSVS 474

  Fly   489 WIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAG 553
            .:||:|..|.||:.||..|...|::.||..::|..:..:|.|.:..|:|..|...::|......|
 Frog   475 RVYGIKNFCRDIQMMLGFKPGLYFKACWIFLSPVTLMCLLAYSILKYQPSQYGSYKFPLWSEALG 539

  Fly   554 WIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQPTANWGP 596
            .::..|..:.:|...||.|.::.|..: .:...|.:|..:|||
 Frog   540 ILMGLLSCMMIPIGMLVAILKEEGSLW-ERIRQASRPAMDWGP 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 198/487 (41%)
slc6a7XP_002940131.3 SLC5-6-like_sbd 37..581 CDD:382020 213/552 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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