DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and si:ch211-132b12.1

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001076533.1 Gene:si:ch211-132b12.1 / 100034467 ZFINID:ZDB-GENE-050420-315 Length:586 Species:Danio rerio


Alignment Length:544 Identity:190/544 - (34%)
Similarity:312/544 - (57%) Gaps:20/544 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 INCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRP 109
            ||.|.|     :|..|...:|||.:.....||||||||||::..:.|||||||||::.::..|.|
Zfish     4 INGEIE-----ERGYWGSKMEFLLAVAGNVVGLGNVWRFPYLCYKYGGGAFLIPYLVFVVTCGVP 63

  Fly   110 VYYLEVIIGQFSSRGCIRAFD-MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLP 173
            ::.||:.:||::.:|.:..:. :.|:..||.||.......:..||..|:|..:.||:.||...||
Zfish    64 LFLLEMAMGQYTQQGGVTCWHRLCPLAEGIGYGGQLILLYSCMYYIVILAWALFYLIFSFKSQLP 128

  Fly   174 WTYCLVEWG-KSCV--ATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLC 235
            |..|...|. ..|:  .|.....|.:|::....:|..|:.:.||.....::|  :|..:|:::||
Zfish   129 WATCDNTWNTDDCINLVTKNLTINRTSLINSTPAATEFWERRVLSLSGGIED--IGKINWEILLC 191

  Fly   236 LLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNP 300
            |:|.|:|....:.||::|:||..||.|.||||:::|||||.:|||||.||:|::|.|:.::|.:|
Zfish   192 LIAMWIICYFCVWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPARLADP 256

  Fly   301 HVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAF 365
            .||..|.||:.||.::..|::.:.||:|.::.|.::|.:.:..::|:||.:||..:|.:||.:|.
Zfish   257 QVWLEAGTQILFSYSVSVGSITVLASYNKYHNNCYRDCLGLCLLNSVTSFVAGFAVFTVLGFMAQ 321

  Fly   366 ETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKD 430
            |... .|.:|.:.|.|||||:||:|:|...: |||:||.||.|:::||:.:......|||..|.|
Zfish   322 EQGV-PIEEVAESGPGLAFIAYPQAVAMMPF-PQLWAVCFFIMIILLGLDTQFVSMEAVVTSVMD 384

  Fly   431 RFTHL-----PHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALV-LAIAELLAVGW 489
            .|..:     ...:|.:...:..|....:.:|.||.:|..|.|:|.|....|: |::.|.|.:||
Zfish   385 MFPVVLRREGRREILLLFFCLTCFFGQFIMVTEGGMYVFQLFDYYACNGTCLLFLSVFESLTMGW 449

  Fly   490 IYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTY-RGVQYPPVYYMAG 553
            |:|..|:...||.|...:.::.:.:||..:.|.:..:..|..:..|:|||: |...:|...|:.|
Zfish   450 IFGADRLFDIIEDMTKSRPNYIFMLCWKYLTPLVSLVCFVCSMVEYQPLTFNRWYVFPDWAYVLG 514

  Fly   554 WIIWGLGVLQLPFWALVTIYQQPG 577
            |::....::.:|.|||..:..:.|
Zfish   515 WLLALSSIVLVPGWALGRLCSEKG 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 171/483 (35%)
si:ch211-132b12.1NP_001076533.1 SLC6sbd-TauT-like 11..549 CDD:271387 186/532 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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