DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and MLC2

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_015514.1 Gene:MLC2 / 856318 SGDID:S000006392 Length:163 Species:Saccharomyces cerevisiae


Alignment Length:117 Identity:34/117 - (29%)
Similarity:59/117 - (50%) Gaps:7/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----GNGT 63
            :|||::.|.:.|:||.:.|:|.||.|:..:|..:..:||:..|:.|...|:.:.|..    |...
Yeast    10 NQLTQDYINKLKDAFQMLDEDEDGLISRGDLTKIYATLGKTLTDEEWSKMVPDNDTSTAEVGEEG 74

  Fly    64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 115
            :.||.||::|.:.:......||:.|:.:..   |.|......|..|:.:|.|
Yeast    75 VSFPIFLSIMGKNLSQFPEREELEESLKAI---GRGHDLNVPLNEVIDSLKE 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 34/117 (29%)
MLC2NP_015514.1 FRQ1 4..163 CDD:227455 34/117 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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