DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and CMD1

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_009667.1 Gene:CMD1 / 852406 SGDID:S000000313 Length:147 Species:Saccharomyces cerevisiae


Alignment Length:147 Identity:88/147 - (59%)
Similarity:123/147 - (83%) Gaps:1/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
            |:..|||||||||||||:|||||.:|:|::.||.|||||||.:|:|||:.|::||:|.|||..|:
Yeast     1 MSSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 65

  Fly    66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
            |.|||.:|:|::|..|||:|:.|||:||||:|:|.||||||:||:|::||||||.|||:|:||..
Yeast    66 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS 130

  Fly   131 IDGDGQVNYEEFVTMMT 147
             ||.|::|.::|..:::
Yeast   131 -DGSGEINIQQFAALLS 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 88/147 (60%)
CMD1NP_009667.1 PTZ00184 1..145 CDD:185504 88/144 (61%)

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