DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and CP1

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_199759.1 Gene:CP1 / 835008 AraportID:AT5G49480 Length:160 Species:Arabidopsis thaliana


Alignment Length:147 Identity:45/147 - (30%)
Similarity:78/147 - (53%) Gaps:8/147 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGT 63
            :|..:|......|:.||.:.|.|.||.|::.:|......:  |:|..|..:..||:..||:.:|.
plant     7 IAIPITTTANPNFRPAFEIIDTDHDGKISSDDLRAFYAGIPSGENNDETMIGTMISVADANKDGF 71

  Fly    64 IDFPEF-----LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
            ::|.||     .|..:|.....| :..:::.|:|.||||:|.:|..:|:..|.:.|..:||:|:.
plant    72 VEFDEFEKVLETTPFSRSGNGGD-DGLMKDVFKVMDKDGDGRLSYGDLKSYMDSAGLAVTDDEIK 135

  Fly   124 EMIREADIDGDGQVNYE 140
            .|||.|..|.:..|:::
plant   136 SMIRLAGGDLNDGVSFD 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 45/147 (31%)
CP1NP_199759.1 FRQ1 13..158 CDD:444056 43/141 (30%)

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