DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and CAM1

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001154755.1 Gene:CAM1 / 833756 AraportID:AT5G37780 Length:175 Species:Arabidopsis thaliana


Alignment Length:175 Identity:133/175 - (76%)
Similarity:144/175 - (82%) Gaps:26/175 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADQLTEEQIAEFKEAFSLFDKDGD--------------------------GTITTKELGTVMRS 39
            ||||||:|||:||||||||||||||                          |.||||||||||||
plant     1 MADQLTDEQISEFKEAFSLFDKDGDVFVLSDLGFDFKRLSNCLETTPELSHGCITTKELGTVMRS 65

  Fly    40 LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 104
            |||||||||||||||||||||||||||||||.:||:||||||||||::|||||||||.|||||||
plant    66 LGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAA 130

  Fly   105 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
            ||||||||||||||||||:|||||||:|||||:||||||.:|.:|
plant   131 ELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMAK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 132/173 (76%)
CAM1NP_001154755.1 PTZ00184 1..175 CDD:185504 132/173 (76%)
EFh 12..100 CDD:238008 58/87 (67%)
EFh 111..173 CDD:238008 53/61 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1856
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 275 1.000 Inparanoid score I893
OMA 1 1.010 - - QHG53747
OrthoDB 1 1.010 - - D1386217at2759
OrthoFinder 1 1.000 - - FOG0000535
OrthoInspector 1 1.000 - - otm3085
orthoMCL 1 0.900 - - OOG6_100851
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X199
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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