DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cam and CDPK9

DIOPT Version :9

Sequence 1:	NP_001246276.1	Gene:	Cam / 36329	FlyBaseID:	FBgn0000253	Length:	149	Species:	Drosophila melanogaster
Sequence 2:	NP_197748.1	Gene:	CDPK9 / 832424	AraportID:	AT5G23580	Length:	490	Species:	Arabidopsis thaliana

Alignment Length:	148	Identity:	62/148 - (41%)
Similarity:	91/148 - (61%)	Gaps:	7/148 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
            :|::|:||:|...||.|.:.|.|..||||.:||...||.:|....|:|:|:::...|.|.:||||
plant   316 IAERLSEEEIGGLKELFKMIDTDKSGTITFEELKDSMRRVGSELMESEIQELLRAADVDESGTID 380

  Fly    66 FPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
            :.|||  |:...|:   :.||.:..||..||||.:|:|:..||:......|  :.|..:||||::
plant   381 YGEFLAATIHLNKL---EREENLVAAFSFFDKDASGYITIEELQQAWKEFG--INDSNLDEMIKD 440

  Fly   129 ADIDGDGQVNYEEFVTMM 146
            .|.|.|||::|.|||.||
plant   441 IDQDNDGQIDYGEFVAMM 458

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cam	NP_001246276.1	PTZ00184	1..149	CDD:185504	62/148 (42%)
CDPK9	NP_197748.1	STKc_CAMK	21..279	CDD:270687
		Pkinase	22..280	CDD:278497
		PTZ00184	316..458	CDD:185504	60/146 (41%)
		EFh	328..387	CDD:238008	26/58 (45%)
		EFh	400..459	CDD:238008	27/61 (44%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910