DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and Cabp4

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:XP_036017598.1 Gene:Cabp4 / 73660 MGIID:1920910 Length:297 Species:Mus musculus


Alignment Length:172 Identity:42/172 - (24%)
Similarity:64/172 - (37%) Gaps:52/172 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 GDSMMTVGEERNGGQASSS-----SYSSSSSSSSSASSNSSHSPGGGGATAAAADSGLDRMAIGG 307
            ||:|:..|.:.:..::.|:     ..|.||.|..|...||..|                      
Mouse   129 GDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKS---------------------- 171

  Fly   308 DAQEILSVLSDIYDKELVGVIGWAKQIPGFTDLPLNDQMRLLQVSWAELLTLMLAYRSIPFDGRL 372
              |...:|||..|.:.........||:|        |..||: |.::..|     .|.|...|||
Mouse   172 --QSWYNVLSPTYKQRNEDFRKLFKQLP--------DTERLI-VDYSCAL-----QRDILLQGRL 220

  Fly   373 YFATDFWLDERSAKECGALDLYNHLAQITQRLEKI-SATKEE 413
            |.:.: |:       |...:::.....:|.||:.| |.|||:
Mouse   221 YLSEN-WI-------CFYSNIFRWETLLTVRLKDICSMTKEK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504
Cabp4XP_036017598.1 PTZ00184 133..262 CDD:185504 39/168 (23%)
Blue background indicates that the domain is not in the aligned region.

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