DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and Cetn4

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001258080.1 Gene:Cetn4 / 688611 RGDID:1586489 Length:168 Species:Rattus norvegicus


Alignment Length:143 Identity:70/143 - (48%)
Similarity:96/143 - (67%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
            :|.:.|..|.||||.|||.||.|||..|||...||:||..|.:.|::.:|.|:|.:|.|||.|.:
  Rat    20 ELNDTQKQEIKEAFDLFDIDGSGTIDLKELKIAMRALGFEPKKEEVKQLITEIDKEGTGTICFED 84

  Fly    69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
            |..:|:.||.:.|.:|||.:||::||.|..|.||...::.|...|||.||::|:.||:.|||.||
  Rat    85 FFAIMSIKMSEKDEKEEILKAFKLFDDDATGSISLNNIKRVAKELGENLTEDELQEMLDEADRDG 149

  Fly   134 DGQVNYEEFVTMM 146
            ||::|.|||:.||
  Rat   150 DGEINEEEFLKMM 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 70/143 (49%)
Cetn4NP_001258080.1 PTZ00183 13..168 CDD:185503 70/143 (49%)
EFh 28..90 CDD:238008 31/61 (51%)
EFh 101..163 CDD:238008 32/62 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53747
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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