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Protein Alignment Cam and Ncs1

DIOPT Version :9

Sequence 1:	NP_001246276.1	Gene:	Cam / 36329	FlyBaseID:	FBgn0000253	Length:	149	Species:	Drosophila melanogaster
Sequence 2:	NP_077342.1	Gene:	Ncs1 / 65153	RGDID:	68417	Length:	190	Species:	Rattus norvegicus

Alignment Length:	144	Identity:	34/144 - (23%)
Similarity:	67/144 - (46%)	Gaps:	32/144 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
            |.|::.:..|...||.|    :..|.               :.|..|.:.:|.|:|.||:..::.
  Rat    46 AGFQKIYKQFFPFGDPT----KFATF---------------VFNVFDENKDGRIEFSEFIQALSV 91

  Fly    76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE------KLTDEE------VDEMIRE 128
            ..:.| .:|::|.||:::|.|.:|:|:..|:..::..:.:      :|.:||      ||.:...
  Rat    92 TSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAM 155

  Fly   129 ADIDGDGQVNYEEF 142
            .|.:.||::..:||
  Rat   156 MDKNADGKLTLQEF 169

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.