DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and cabp2a

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001025439.2 Gene:cabp2a / 572226 ZFINID:ZDB-GENE-050913-25 Length:236 Species:Danio rerio


Alignment Length:148 Identity:69/148 - (46%)
Similarity:97/148 - (65%) Gaps:8/148 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
            |..|:|.|.||||..||||.||.|:.|:||..||::|..|||.||.::..::   ..|.:||.:|
Zfish    91 LRPEEIEELKEAFREFDKDKDGFISCKDLGECMRTMGYMPTEMELIELSQQI---CGGRVDFEDF 152

  Fly    70 LTMMARKM----KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
            :.:|..||    .|....:|:|:|||.||.:|:|.||.||||..|..| ||:|...|:||::|:.
Zfish   153 VDLMGPKMLAETADMIGVKELRDAFREFDSNGDGQISLAELREAMKKLMGEQLNHREIDEILRDV 217

  Fly   130 DIDGDGQVNYEEFVTMMT 147
            |::|||.|::||||.||:
Zfish   218 DLNGDGLVDFEEFVRMMS 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 69/148 (47%)
cabp2aNP_001025439.2 PTZ00184 91..234 CDD:185504 67/145 (46%)

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