DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cam and capsla

DIOPT Version :9

Sequence 1:	NP_001246276.1	Gene:	Cam / 36329	FlyBaseID:	FBgn0000253	Length:	149	Species:	Drosophila melanogaster
Sequence 2:	NP_001017676.1	Gene:	capsla / 550371	ZFINID:	ZDB-GENE-030131-7291	Length:	188	Species:	Danio rerio

Alignment Length:	136	Identity:	39/136 - (28%)
Similarity:	62/136 - (45%)	Gaps:	10/136 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD 81
            |...|.||..::..:|....::..|.:....:.|.:...:|.||:|:|:|.|||..:...|...
Zfish    28 FRSMDDDGSKSLDFQEFVRGLQDYGVSVGRDQAQQIFAMMDKDGSGSINFDEFLEKLRPPMSSA- 91

  Fly    82 SEEEIREAFRVFDKDGNGFISAAELR-------HVMTNLGEKLTDEEVDEMIREADI--DGDGQV 137
            ..:.||:||:.|||.|:|..:..:|:       |.....||....:.....:...|.  |.||:|
Zfish    92 RMQVIRQAFQKFDKSGDGVETVEDLQGVYNSKHHPKYKSGEWTETQVFHSFLDSFDSPHDKDGKV 156

  Fly   138 NYEEFV 143
            ..||||
Zfish   157 TLEEFV 162

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cam	NP_001246276.1	PTZ00184	1..149	CDD:185504	39/136 (29%)
capsla	NP_001017676.1	EF-hand_7	24..82	CDD:290234	15/53 (28%)
		EFh	26..82	CDD:238008	15/53 (28%)
		EFh	59..>109	CDD:238008	19/50 (38%)
		EF-hand_7	60..120	CDD:290234	21/60 (35%)
		EF-hand_7	96..165	CDD:290234	22/67 (33%)
		EFh	96..162	CDD:298682	20/65 (31%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910