DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and myl9a

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001006027.1 Gene:myl9a / 450006 ZFINID:ZDB-GENE-041010-120 Length:174 Species:Danio rerio


Alignment Length:146 Identity:65/146 - (44%)
Similarity:92/146 - (63%) Gaps:7/146 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
            |.||   .||.||||||::.|::.||.|..::|..::.|||:||::..|:.|::|..    |.|:
Zfish    26 MFDQ---SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPSDEYLEGMMSEAP----GPIN 83

  Fly    66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
            |..||||...::..||.|:.||.||..||:|..|||....||.::|.:|::.|||||||:.|||.
Zfish    84 FTMFLTMFGERLNGTDPEDVIRNAFTCFDEDATGFIHEDHLRDLLTTMGDRFTDEEVDELFREAP 148

  Fly   131 IDGDGQVNYEEFVTMM 146
            ||..|..||.||..::
Zfish   149 IDKKGNFNYVEFTRIL 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 65/146 (45%)
myl9aNP_001006027.1 FRQ1 20..170 CDD:227455 65/146 (45%)
EFh 34..>78 CDD:238008 18/43 (42%)
EFh 104..165 CDD:298682 31/61 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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