DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and mylpfb

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001004668.1 Gene:mylpfb / 447930 ZFINID:ZDB-GENE-040912-115 Length:170 Species:Danio rerio


Alignment Length:142 Identity:48/142 - (33%)
Similarity:77/142 - (54%) Gaps:5/142 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFL 70
            :.||.|:||||::.|::.||.|:..:|..|:.::|| |....||:.|:.|    .:|.|:|..||
Zfish    25 QSQIQEYKEAFTIIDQNRDGIISKDDLRDVLATMGQLNVKNEELEAMVKE----ASGPINFTVFL 85

  Fly    71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
            ||...|:|..|.|:.|..||:|.|.:..|.|....|..::|...::.|.||:..:......|..|
Zfish    86 TMFGEKLKGADPEDVIVSAFKVLDPEATGTIKKEFLEELLTTQCDRFTAEEMKNLWAAFPPDVAG 150

  Fly   136 QVNYEEFVTMMT 147
            .|:|:....::|
Zfish   151 NVDYKNICYVIT 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 48/142 (34%)
mylpfbNP_001004668.1 PTZ00184 22..158 CDD:185504 47/136 (35%)

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