DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and CG17770

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_651432.1 Gene:CG17770 / 43118 FlyBaseID:FBgn0039374 Length:164 Species:Drosophila melanogaster


Alignment Length:144 Identity:65/144 - (45%)
Similarity:100/144 - (69%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
            |||||:.:.:.||||||......|....|..:|.|:...|::.|||::..|:||||:|.:...:|
  Fly    20 LTEEQVKDLEIAFSLFDDQDTKVIPITNLRQLMLSVAHYPSDMELQEIQAEIDADGSGELYLSDF 84

  Fly    70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134
            |.:|:::..:..:|:||..|||||||:|.|.||.:|.||:|.|:||:|||:||:|:||:|:.|.:
  Fly    85 LHIMSQRYANMSTEDEIIAAFRVFDKEGTGLISESEFRHIMQNMGEQLTDDEVEEIIRDANSDLE 149

  Fly   135 GQVNYEEFVTMMTS 148
            |.::|..||.||::
  Fly   150 GNIDYVRFVRMMST 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 65/144 (45%)
CG17770NP_651432.1 PTZ00184 19..161 CDD:185504 63/140 (45%)
EFh 27..89 CDD:298682 22/61 (36%)
EFh 63..126 CDD:238008 29/62 (47%)
EFh 100..162 CDD:238008 35/61 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443669
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BAEQ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23050
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X199
54.840

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