DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and efcab7

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001002120.1 Gene:efcab7 / 415210 ZFINID:ZDB-GENE-040625-115 Length:603 Species:Danio rerio


Alignment Length:122 Identity:40/122 - (32%)
Similarity:78/122 - (63%) Gaps:7/122 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ITTK-ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 91
            :|:| :|.||::..|:||:    |..:::....|...::|.:|..:: :|.|.|: .:::...|:
Zfish    28 MTSKDQLCTVLQQAGRNPS----QKALDKYWPPGTKKLNFDDFCEIL-KKEKKTE-PDQLMTIFK 86

  Fly    92 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
            .||.:|:|:||..||..::|:.|||::.:||||:...||::.||:::|.||..::.|
Zfish    87 KFDTNGDGYISHDELSRILTSSGEKMSHKEVDEIFTLADVNKDGKLDYAEFCRLLGS 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 40/122 (33%)
efcab7NP_001002120.1 EF-hand_8 57..100 CDD:290545 13/44 (30%)
EFh 80..141 CDD:238008 24/60 (40%)
EF-hand_7 81..141 CDD:290234 24/59 (41%)
EFh 380..439 CDD:298682
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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