DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and pvalb5

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_997050.1 Gene:pvalb5 / 335623 ZFINID:ZDB-GENE-050417-336 Length:108 Species:Danio rerio


Alignment Length:84 Identity:24/84 - (28%)
Similarity:43/84 - (51%) Gaps:9/84 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK---LTDEEVDEMIR 127
            |.|.:.::.|...|.:      :.|:..|:|.:|:|...||:..:.|...|   ||:.|.:.::.
Zfish    30 FFEQVGLIGRASSDGE------KVFKALDQDKSGYIEKEELKRFLQNFCSKARELTEAETNTLLA 88

  Fly   128 EADIDGDGQVNYEEFVTMM 146
            ..|.||||::..|||..::
Zfish    89 AGDKDGDGKIGIEEFCALL 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 24/84 (29%)
pvalb5NP_997050.1 EFh 45..108 CDD:238008 20/69 (29%)
EF-hand_7 45..107 CDD:290234 20/67 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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