DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and CG17237

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster


Alignment Length:147 Identity:45/147 - (30%)
Similarity:77/147 - (52%) Gaps:12/147 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL- 70
            :.:|.|....|...|..||..|:.:.||..:|::|..||||.:...:.:.:|.....|.|.|.: 
  Fly    42 KSRIMEMHAIFLGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRICFDEVMG 106

  Fly    71 ---------TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
                     .|::.|.|..::::.: .:.||||.|.:|:|.|..||.::|..||.:...||||::
  Fly   107 IYSSLGKHGGMLSPKKKQIEADQFV-SSLRVFDTDKSGWIPAIRLRRILTKTGECMGSMEVDELL 170

  Fly   127 READIDGDGQVNYEEFV 143
             :..|:.||.|:|::.|
  Fly   171 -QGRINKDGLVDYKKLV 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 45/147 (31%)
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 45/144 (31%)

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