DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cam and aif1l

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_942571.1 Gene:aif1l / 321033 ZFINID:ZDB-GENE-030131-9646 Length:148 Species:Danio rerio


Alignment Length:92 Identity:25/92 - (27%)
Similarity:44/92 - (47%) Gaps:6/92 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
            |::..||..::.||.:..|.|....|..:|..||...|..:::.||:||....:.||::.:|:.|
Zfish    45 EKLDSFKNKYAEFDLNDQGEIDMMGLKRMMEKLGVPKTHLQMKKMISEVTGGCSDTINYRDFVKM 109

  Fly    73 MARKMKDTDSEEEIREAFRVFDKDGNG 99
            |..|      ...:.:...:|:...||
Zfish   110 MLGK------RSAVLKLVMMFEDKANG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 25/92 (27%)
aif1lNP_942571.1 EFh 57..110 CDD:298682 16/52 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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