DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and Cabp1

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001297641.1 Gene:Cabp1 / 29867 MGIID:1352750 Length:350 Species:Mus musculus


Alignment Length:148 Identity:62/148 - (41%)
Similarity:98/148 - (66%) Gaps:5/148 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
            |..|:|.|.:|||..||||.||.|..::||..||::|..|||.||.::..:::.:..|.:||.:|
Mouse   202 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 266

  Fly    70 LTMMARKM----KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREA 129
            :.:|..|:    .|....:|:|:|||.||.:|:|.||.:|||..|.. ||.::...:::|:||:.
Mouse   267 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDV 331

  Fly   130 DIDGDGQVNYEEFVTMMT 147
            |::|||:|::||||.||:
Mouse   332 DLNGDGRVDFEEFVRMMS 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 62/148 (42%)
Cabp1NP_001297641.1 PTZ00184 201..348 CDD:185504 60/145 (41%)

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