DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and Tnnc2

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001032428.1 Gene:Tnnc2 / 296369 RGDID:1311973 Length:160 Species:Rattus norvegicus


Alignment Length:156 Identity:80/156 - (51%)
Similarity:109/156 - (69%) Gaps:10/156 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADQ-------LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 58
            |.||       |:||.|||||.||.:||.||.|.|:.||||||||.|||.||:.||..:|.|||.
  Rat     1 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDE 65

  Fly    59 DGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
            ||:|||||.|||.||.|:||:.   .||||:.|.||:||::.:|:|.|.||..:....||.:|||
  Rat    66 DGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDE 130

  Fly   121 EVDEMIREADIDGDGQVNYEEFVTMM 146
            |::.::::.|.:.||:::::||:.||
  Rat   131 EIESLMKDGDKNNDGRIDFDEFLKMM 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 80/156 (51%)
Tnnc2NP_001032428.1 PTZ00184 12..156 CDD:185504 75/143 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1386217at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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